Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Mir6982-201ENSMUST00000184354 68 ntBASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.04□□□□□ -0.16
Rpusd4Q9CWX4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Mir8112-201ENSMUST00000184382 131 ntBASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rpusd4Q9CWX4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpusd4Q9CWX4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rpusd4Q9CWX4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.02□□□□□ -0.16
Rpusd4Q9CWX4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpusd4Q9CWX4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rpusd4Q9CWX4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpusd4Q9CWX4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpusd4Q9CWX4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rpusd4Q9CWX4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rpusd4Q9CWX4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Gm24841-201ENSMUST00000158676 357 ntBASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Gm38027-201ENSMUST00000192315 235 ntBASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rpusd4Q9CWX4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms