Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 AL049840.3-201ENST00000602669 611 ntBASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 ECEL1P1-201ENST00000373592 1742 ntBASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.36■□□□□ 0.69
LRFN3Q9BTN0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 COX20P2-201ENST00000452636 358 ntBASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 MIR4674-201ENST00000582457 87 ntBASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 Z69720.1-201ENST00000601483 472 ntBASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 AC024243.1-201ENST00000609234 778 ntBASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRFN3Q9BTN0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 KRT18P28-201ENST00000453838 1332 ntBASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 IGHV3-47-201ENST00000425060 335 ntBASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 AC027601.4-201ENST00000611259 610 ntBASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 MIR7706-201ENST00000613747 67 ntBASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.34■□□□□ 0.69
LRFN3Q9BTN0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRFN3Q9BTN0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.33■□□□□ 0.69
LRFN3Q9BTN0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRFN3Q9BTN0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 DNAJB3-202ENST00000449667 1266 ntBASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 SCARNA2-201ENST00000458748 420 ntBASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 AC090616.6-201ENST00000582640 721 ntBASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 AL356488.2-201ENST00000602755 427 ntBASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LRFN3Q9BTN0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 AC127496.7-201ENST00000625110 1798 ntBASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 AC080038.3-201ENST00000623346 1952 ntBASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 YBX2P1-201ENST00000394192 760 ntBASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 RFPL4AP1-201ENST00000530883 850 ntBASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 IGHV3-41-201ENST00000613121 348 ntBASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.32■□□□□ 0.68
LRFN3Q9BTN0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.31■□□□□ 0.68
LRFN3Q9BTN0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms