Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Gm37025-201ENSMUST00000195159 829 ntBASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Odf3b-204ENSMUST00000227834 930 ntBASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc47a1Q8K0H1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc47a1Q8K0H1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc47a1Q8K0H1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc47a1Q8K0H1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Slc47a1Q8K0H1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc47a1Q8K0H1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc47a1Q8K0H1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc47a1Q8K0H1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Slc47a1Q8K0H1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.33■□□□□ 0.21
Slc47a1Q8K0H1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Slc47a1Q8K0H1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Gm21814-202ENSMUST00000203277 873 ntBASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Gm3375-201ENSMUST00000203929 796 ntBASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Slc47a1Q8K0H1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc47a1Q8K0H1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Slc47a1Q8K0H1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc47a1Q8K0H1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc47a1Q8K0H1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc47a1Q8K0H1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Slc47a1Q8K0H1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Slc47a1Q8K0H1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms