Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rdh1Q8CGV4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Gm34391-201ENSMUST00000203706 907 ntBASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rdh1Q8CGV4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Gm13312-201ENSMUST00000119631 718 ntBASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.03■□□□□ 0.16
Rdh1Q8CGV4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rdh1Q8CGV4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rdh1Q8CGV4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rdh1Q8CGV4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rdh1Q8CGV4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rdh1Q8CGV4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rdh1Q8CGV4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rdh1Q8CGV4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rdh1Q8CGV4 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.02■□□□□ 0.15
Rdh1Q8CGV4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rdh1Q8CGV4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rdh1Q8CGV4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.01■□□□□ 0.15
Rdh1Q8CGV4 Gm7461-201ENSMUST00000058918 827 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms