Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Rnf38Q8BI21 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rnf38Q8BI21 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rnf38Q8BI21 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rnf38Q8BI21 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Rnf38Q8BI21 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
Rnf38Q8BI21 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Mir1199-201ENSMUST00000117015 119 ntBASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Il3ra-202ENSMUST00000223589 738 ntBASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rnf38Q8BI21 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rnf38Q8BI21 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms