Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim65Q8BFW4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim65Q8BFW4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Gm11336-201ENSMUST00000118168 334 ntBASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.72■□□□□ 0.43
Trim65Q8BFW4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Gm22697-201ENSMUST00000175194 63 ntBASIC17.71■□□□□ 0.43
Trim65Q8BFW4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim65Q8BFW4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim65Q8BFW4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trim65Q8BFW4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms