Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3bQ80YF6 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.02□□□□□ -0.16
Upk3bQ80YF6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3bQ80YF6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3bQ80YF6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Upk3bQ80YF6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Upk3bQ80YF6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Upk3bQ80YF6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3bQ80YF6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.02□□□□□ -0.16
Upk3bQ80YF6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3bQ80YF6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3bQ80YF6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3bQ80YF6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Gm43183-201ENSMUST00000200632 547 ntBASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
Upk3bQ80YF6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.01□□□□□ -0.17
Upk3bQ80YF6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Gm9731-201ENSMUST00000209480 747 ntBASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Upk3bQ80YF6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Upk3bQ80YF6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Upk3bQ80YF6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14□□□□□ -0.17
Upk3bQ80YF6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14□□□□□ -0.17
Upk3bQ80YF6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14□□□□□ -0.17
Upk3bQ80YF6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14□□□□□ -0.17
Upk3bQ80YF6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Upk3bQ80YF6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14□□□□□ -0.17
Upk3bQ80YF6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14□□□□□ -0.17
Upk3bQ80YF6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14□□□□□ -0.17
Upk3bQ80YF6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14□□□□□ -0.17
Upk3bQ80YF6 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Upk3bQ80YF6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Upk3bQ80YF6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Upk3bQ80YF6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Upk3bQ80YF6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Upk3bQ80YF6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms