Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Actl10-202ENSMUST00000226583 1501 ntBASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sp140Q6NSQ5 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sp140Q6NSQ5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Gm16061-201ENSMUST00000122167 857 ntBASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sp140Q6NSQ5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sp140Q6NSQ5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sp140Q6NSQ5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sp140Q6NSQ5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sp140Q6NSQ5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Sp140Q6NSQ5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Gm7889-201ENSMUST00000185591 958 ntBASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Gm43799-201ENSMUST00000201845 579 ntBASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Gm10252-201ENSMUST00000209541 832 ntBASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Gm7213-201ENSMUST00000215977 950 ntBASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sp140Q6NSQ5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Gm15565-201ENSMUST00000118890 427 ntBASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sp140Q6NSQ5 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms