Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Gm13148-201ENSMUST00000118892 745 ntBASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Gm12918-201ENSMUST00000120234 636 ntBASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Gm15710-201ENSMUST00000121821 636 ntBASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Gm5075-201ENSMUST00000196916 622 ntBASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Krt42Q6IFX2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Krt42Q6IFX2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Krt42Q6IFX2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Gm42642-201ENSMUST00000200683 355 ntBASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Rab3c-203ENSMUST00000224180 967 ntBASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 App-207ENSMUST00000227737 2827 ntBASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Krt42Q6IFX2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Krt42Q6IFX2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Krt42Q6IFX2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.02■□□□□ 0.31
Krt42Q6IFX2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Krt42Q6IFX2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Krt42Q6IFX2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Krt42Q6IFX2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Krt42Q6IFX2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Krt42Q6IFX2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Krt42Q6IFX2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Krt42Q6IFX2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Krt42Q6IFX2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms