Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scube3Q66PY1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Scube3Q66PY1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scube3Q66PY1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Scube3Q66PY1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC17.35■□□□□ 0.37
Scube3Q66PY1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.35■□□□□ 0.37
Scube3Q66PY1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Gm27704-201ENSMUST00000185094 107 ntBASIC17.34■□□□□ 0.37
Scube3Q66PY1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scube3Q66PY1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scube3Q66PY1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.33■□□□□ 0.37
Scube3Q66PY1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scube3Q66PY1 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scube3Q66PY1 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.33■□□□□ 0.37
Scube3Q66PY1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scube3Q66PY1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scube3Q66PY1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube3Q66PY1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Scube3Q66PY1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube3Q66PY1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube3Q66PY1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube3Q66PY1 Gm45328-201ENSMUST00000210942 917 ntBASIC17.33■□□□□ 0.36
Scube3Q66PY1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube3Q66PY1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube3Q66PY1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube3Q66PY1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Scube3Q66PY1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube3Q66PY1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Scube3Q66PY1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Scube3Q66PY1 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.32■□□□□ 0.36
Scube3Q66PY1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Scube3Q66PY1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms