Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm4974-201ENSMUST00000209974 875 ntBASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm4968-201ENSMUST00000071458 858 ntBASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Gm5874-201ENSMUST00000096101 508 ntBASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav15-1-dv6-1Q5R1D2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav15-1-dv6-1Q5R1D2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms