Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.56■□□□□ 0.08
Mmp25Q3U435 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.56■□□□□ 0.08
Mmp25Q3U435 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.56■□□□□ 0.08
Mmp25Q3U435 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Mmp25Q3U435 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.55■□□□□ 0.08
Mmp25Q3U435 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.55■□□□□ 0.08
Mmp25Q3U435 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Mmp25Q3U435 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Gm14859-201ENSMUST00000117752 357 ntBASIC15.54■□□□□ 0.08
Mmp25Q3U435 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.54■□□□□ 0.08
Mmp25Q3U435 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.54■□□□□ 0.08
Mmp25Q3U435 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Gm7284-201ENSMUST00000131667 944 ntBASIC15.53■□□□□ 0.08
Mmp25Q3U435 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Gm27704-201ENSMUST00000185094 107 ntBASIC15.53■□□□□ 0.08
Mmp25Q3U435 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Mmp25Q3U435 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.53■□□□□ 0.08
Mmp25Q3U435 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Mmp25Q3U435 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.53■□□□□ 0.08
Mmp25Q3U435 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms