Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Surf6P70279 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Surf6P70279 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Surf6P70279 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Surf6P70279 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Surf6P70279 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Surf6P70279 Prob1-201ENSMUST00000097619 3021 ntBASIC17.25■□□□□ 0.35
Surf6P70279 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Surf6P70279 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.24■□□□□ 0.35
Surf6P70279 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Gm12441-201ENSMUST00000121806 588 ntBASIC17.24■□□□□ 0.35
Surf6P70279 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.24■□□□□ 0.35
Surf6P70279 Gm6420-201ENSMUST00000193885 723 ntBASIC17.24■□□□□ 0.35
Surf6P70279 Gm6365-201ENSMUST00000054711 744 ntBASIC17.24■□□□□ 0.35
Surf6P70279 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Surf6P70279 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Surf6P70279 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Surf6P70279 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf6P70279 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Surf6P70279 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Surf6P70279 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.23■□□□□ 0.35
Surf6P70279 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Surf6P70279 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
Surf6P70279 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.23■□□□□ 0.35
Surf6P70279 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf6P70279 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Surf6P70279 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Surf6P70279 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf6P70279 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf6P70279 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf6P70279 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Surf6P70279 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf6P70279 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf6P70279 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Surf6P70279 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.22■□□□□ 0.35
Surf6P70279 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Surf6P70279 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.22■□□□□ 0.35
Surf6P70279 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Surf6P70279 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Surf6P70279 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Surf6P70279 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Surf6P70279 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Surf6P70279 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf6P70279 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.21■□□□□ 0.35
Surf6P70279 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Surf6P70279 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Surf6P70279 Nespas-201ENSMUST00000143738 1083 ntBASIC17.21■□□□□ 0.35
Surf6P70279 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf6P70279 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.21■□□□□ 0.35
Surf6P70279 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Surf6P70279 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Surf6P70279 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Surf6P70279 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf6P70279 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf6P70279 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf6P70279 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf6P70279 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms