Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Crnkl1P63154 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Crnkl1P63154 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Crnkl1P63154 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.42■□□□□ 0.22
Crnkl1P63154 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Crnkl1P63154 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.42■□□□□ 0.22
Crnkl1P63154 Gm20049-201ENSMUST00000219950 730 ntBASIC16.42■□□□□ 0.22
Crnkl1P63154 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Crnkl1P63154 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Crnkl1P63154 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.42■□□□□ 0.22
Crnkl1P63154 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Crnkl1P63154 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Crnkl1P63154 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.41■□□□□ 0.22
Crnkl1P63154 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Crnkl1P63154 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Crnkl1P63154 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
Crnkl1P63154 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Crnkl1P63154 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.41■□□□□ 0.22
Crnkl1P63154 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.41■□□□□ 0.22
Crnkl1P63154 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Crnkl1P63154 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.41■□□□□ 0.22
Crnkl1P63154 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Crnkl1P63154 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Crnkl1P63154 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Crnkl1P63154 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Crnkl1P63154 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Crnkl1P63154 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.4■□□□□ 0.22
Crnkl1P63154 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.4■□□□□ 0.22
Crnkl1P63154 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Crnkl1P63154 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.4■□□□□ 0.22
Crnkl1P63154 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.4■□□□□ 0.22
Crnkl1P63154 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Crnkl1P63154 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.4■□□□□ 0.22
Crnkl1P63154 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Crnkl1P63154 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Crnkl1P63154 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Crnkl1P63154 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Crnkl1P63154 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Crnkl1P63154 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms