Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sssca1P56873 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.41□□□□□ -0.26
Sssca1P56873 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.41□□□□□ -0.26
Sssca1P56873 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Gm17661-201ENSMUST00000170317 270 ntBASIC13.41□□□□□ -0.26
Sssca1P56873 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.41□□□□□ -0.26
Sssca1P56873 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sssca1P56873 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sssca1P56873 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sssca1P56873 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.41□□□□□ -0.26
Sssca1P56873 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.41□□□□□ -0.26
Sssca1P56873 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sssca1P56873 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sssca1P56873 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sssca1P56873 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sssca1P56873 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.4□□□□□ -0.26
Sssca1P56873 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sssca1P56873 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.4□□□□□ -0.26
Sssca1P56873 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Sssca1P56873 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sssca1P56873 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
Sssca1P56873 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Sssca1P56873 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Sssca1P56873 Gm27275-201ENSMUST00000184318 272 ntBASIC13.39□□□□□ -0.27
Sssca1P56873 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.39□□□□□ -0.27
Sssca1P56873 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sssca1P56873 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.39□□□□□ -0.27
Sssca1P56873 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sssca1P56873 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.38□□□□□ -0.27
Sssca1P56873 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.38□□□□□ -0.27
Sssca1P56873 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sssca1P56873 Gm18666-201ENSMUST00000190039 958 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms