Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRCA2P51587 KRT18P31-201ENST00000506277 1292 ntBASIC21.7■■□□□ 1.06
BRCA2P51587 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
BRCA2P51587 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRCA2P51587 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.7■■□□□ 1.06
BRCA2P51587 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
BRCA2P51587 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRCA2P51587 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRCA2P51587 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
BRCA2P51587 NUS1P1-201ENST00000446295 882 ntBASIC21.69■■□□□ 1.06
BRCA2P51587 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
BRCA2P51587 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRCA2P51587 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRCA2P51587 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.69■■□□□ 1.06
BRCA2P51587 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.69■■□□□ 1.06
BRCA2P51587 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRCA2P51587 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
BRCA2P51587 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.69■■□□□ 1.06
BRCA2P51587 AC022898.2-201ENST00000616822 1312 ntBASIC21.69■■□□□ 1.06
BRCA2P51587 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
BRCA2P51587 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRCA2P51587 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
BRCA2P51587 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRCA2P51587 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCA2P51587 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.68■■□□□ 1.06
BRCA2P51587 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.68■■□□□ 1.06
BRCA2P51587 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
BRCA2P51587 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.68■■□□□ 1.06
BRCA2P51587 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCA2P51587 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCA2P51587 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.68■■□□□ 1.06
BRCA2P51587 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCA2P51587 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCA2P51587 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.68■■□□□ 1.06
BRCA2P51587 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRCA2P51587 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.68■■□□□ 1.06
BRCA2P51587 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.67■■□□□ 1.06
BRCA2P51587 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRCA2P51587 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRCA2P51587 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRCA2P51587 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.67■■□□□ 1.06
BRCA2P51587 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRCA2P51587 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.67■■□□□ 1.06
BRCA2P51587 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRCA2P51587 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRCA2P51587 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRCA2P51587 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRCA2P51587 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BRCA2P51587 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BRCA2P51587 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
BRCA2P51587 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.67■■□□□ 1.06
BRCA2P51587 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.67■■□□□ 1.06
BRCA2P51587 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
BRCA2P51587 DPP3P2-201ENST00000416030 1696 ntBASIC21.67■■□□□ 1.06
BRCA2P51587 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
BRCA2P51587 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.67■■□□□ 1.06
BRCA2P51587 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.67■■□□□ 1.06
BRCA2P51587 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
BRCA2P51587 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
BRCA2P51587 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.66■■□□□ 1.06
BRCA2P51587 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
BRCA2P51587 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.66■■□□□ 1.06
BRCA2P51587 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.66■■□□□ 1.06
BRCA2P51587 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRCA2P51587 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.66■■□□□ 1.06
BRCA2P51587 LINC00167-201ENST00000530583 1419 ntBASIC21.66■■□□□ 1.06
BRCA2P51587 AC092667.1-201ENST00000434301 2586 ntBASIC21.66■■□□□ 1.06
BRCA2P51587 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.66■■□□□ 1.06
BRCA2P51587 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.66■■□□□ 1.06
BRCA2P51587 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC21.66■■□□□ 1.06
BRCA2P51587 TPSP2-201ENST00000561760 610 ntBASIC21.66■■□□□ 1.06
BRCA2P51587 FEM1AP4-201ENST00000443167 1987 ntBASIC21.66■■□□□ 1.06
BRCA2P51587 IL9RP2-201ENST00000423948 1312 ntBASIC21.66■■□□□ 1.06
BRCA2P51587 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
BRCA2P51587 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRCA2P51587 KRT8P8-201ENST00000434750 1448 ntBASIC21.66■■□□□ 1.06
BRCA2P51587 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.66■■□□□ 1.06
BRCA2P51587 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRCA2P51587 TMEM179-206ENST00000616017 1645 ntBASIC21.66■■□□□ 1.06
BRCA2P51587 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRCA2P51587 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.65■■□□□ 1.06
BRCA2P51587 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRCA2P51587 KRT16P4-201ENST00000453883 522 ntBASIC21.65■■□□□ 1.06
BRCA2P51587 AC117500.6-201ENST00000624871 588 ntBASIC21.65■■□□□ 1.06
BRCA2P51587 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.65■■□□□ 1.06
BRCA2P51587 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.65■■□□□ 1.06
BRCA2P51587 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRCA2P51587 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRCA2P51587 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
BRCA2P51587 TSSC2-201ENST00000450217 709 ntBASIC21.65■■□□□ 1.06
BRCA2P51587 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.65■■□□□ 1.06
BRCA2P51587 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.65■■□□□ 1.06
BRCA2P51587 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
BRCA2P51587 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRCA2P51587 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRCA2P51587 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRCA2P51587 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
BRCA2P51587 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.65■■□□□ 1.06
BRCA2P51587 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.65■■□□□ 1.06
BRCA2P51587 AL162741.1-201ENST00000565563 1558 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms