Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h1dP43277 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h1dP43277 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h1dP43277 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h1dP43277 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h1dP43277 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h1dP43277 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.02□□□□□ -0.16
Hist1h1dP43277 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.02□□□□□ -0.16
Hist1h1dP43277 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h1dP43277 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h1dP43277 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h1dP43277 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.02□□□□□ -0.17
Hist1h1dP43277 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h1dP43277 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hist1h1dP43277 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h1dP43277 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h1dP43277 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h1dP43277 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h1dP43277 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h1dP43277 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.02□□□□□ -0.17
Hist1h1dP43277 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h1dP43277 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.01□□□□□ -0.17
Hist1h1dP43277 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Gm18958-201ENSMUST00000174258 762 ntBASIC14.01□□□□□ -0.17
Hist1h1dP43277 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Il3ra-202ENSMUST00000223589 738 ntBASIC14.01□□□□□ -0.17
Hist1h1dP43277 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h1dP43277 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Hist1h1dP43277 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14□□□□□ -0.17
Hist1h1dP43277 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hist1h1dP43277 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hist1h1dP43277 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14□□□□□ -0.17
Hist1h1dP43277 Gm7638-201ENSMUST00000121348 967 ntBASIC14□□□□□ -0.17
Hist1h1dP43277 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Trmt13-210ENSMUST00000198454 880 ntBASIC14□□□□□ -0.17
Hist1h1dP43277 AC120002.2-201ENSMUST00000220205 773 ntBASIC14□□□□□ -0.17
Hist1h1dP43277 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Hist1h1dP43277 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h1dP43277 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Hist1h1dP43277 Gm12441-201ENSMUST00000121806 588 ntBASIC13.99□□□□□ -0.17
Hist1h1dP43277 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms