Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Cdkn1aP39689 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdkn1aP39689 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.64□□□□□ -0.23
Cdkn1aP39689 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdkn1aP39689 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdkn1aP39689 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.62□□□□□ -0.23
Cdkn1aP39689 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdkn1aP39689 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdkn1aP39689 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.61□□□□□ -0.23
Cdkn1aP39689 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdkn1aP39689 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Cdkn1aP39689 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdkn1aP39689 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms