Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
P04224 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
P04224 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.56□□□□□ -0.08
P04224 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
P04224 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Zfp783-201ENSMUST00000095946 670 ntBASIC14.56□□□□□ -0.08
P04224 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
P04224 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
P04224 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Flg-201ENSMUST00000050758 1488 ntBASIC14.56□□□□□ -0.08
P04224 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
P04224 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.55□□□□□ -0.08
P04224 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.55□□□□□ -0.08
P04224 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
P04224 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.55□□□□□ -0.08
P04224 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
P04224 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.55□□□□□ -0.08
P04224 Gm44549-201ENSMUST00000208351 577 ntBASIC14.55□□□□□ -0.08
P04224 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.55□□□□□ -0.08
P04224 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
P04224 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.55□□□□□ -0.08
P04224 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
P04224 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.54□□□□□ -0.08
P04224 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
P04224 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
P04224 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.54□□□□□ -0.08
P04224 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.54□□□□□ -0.08
P04224 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
P04224 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
P04224 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
P04224 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
P04224 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.53□□□□□ -0.08
P04224 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
P04224 Gm42569-201ENSMUST00000200539 472 ntBASIC14.53□□□□□ -0.08
P04224 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.53□□□□□ -0.08
P04224 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
P04224 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
P04224 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms