Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Trove2O08848 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Trove2O08848 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Trove2O08848 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Gm13401-201ENSMUST00000117074 291 ntBASIC17■□□□□ 0.31
Trove2O08848 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17■□□□□ 0.31
Trove2O08848 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trove2O08848 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trove2O08848 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Trove2O08848 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.99■□□□□ 0.31
Trove2O08848 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.99■□□□□ 0.31
Trove2O08848 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.99■□□□□ 0.31
Trove2O08848 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trove2O08848 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Trove2O08848 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trove2O08848 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trove2O08848 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Trove2O08848 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trove2O08848 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
Trove2O08848 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.98■□□□□ 0.31
Trove2O08848 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trove2O08848 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.98■□□□□ 0.31
Trove2O08848 Gm18025-201ENSMUST00000221733 862 ntBASIC16.98■□□□□ 0.31
Trove2O08848 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.98■□□□□ 0.31
Trove2O08848 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trove2O08848 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.98■□□□□ 0.31
Trove2O08848 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trove2O08848 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.97■□□□□ 0.31
Trove2O08848 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.97■□□□□ 0.31
Trove2O08848 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.97■□□□□ 0.31
Trove2O08848 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.97■□□□□ 0.31
Trove2O08848 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trove2O08848 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trove2O08848 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trove2O08848 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trove2O08848 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trove2O08848 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.97■□□□□ 0.31
Trove2O08848 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trove2O08848 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trove2O08848 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trove2O08848 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.96■□□□□ 0.31
Trove2O08848 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trove2O08848 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.96■□□□□ 0.31
Trove2O08848 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms