Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav7-1A0A0G2JEV5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm12441-201ENSMUST00000121806 588 ntBASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm37856-201ENSMUST00000191634 999 ntBASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Trav7-1A0A0G2JEV5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav7-1A0A0G2JEV5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms