Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm6365-201ENSMUST00000054711 744 ntBASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Flg-201ENSMUST00000050758 1488 ntBASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Mir8112-201ENSMUST00000184382 131 ntBASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
Trav3n-3A0A0G2JEM0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms