Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm26039-201ENSMUST00000158152 144 ntBASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv30A0A0B4J1P1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Actl10-202ENSMUST00000226583 1501 ntBASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trbv30A0A0B4J1P1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm13186-201ENSMUST00000118031 316 ntBASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm21559-201ENSMUST00000220638 855 ntBASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm8587-201ENSMUST00000076538 843 ntBASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv30A0A0B4J1P1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm18115-201ENSMUST00000221209 621 ntBASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Gm18032-201ENSMUST00000222541 538 ntBASIC12.46□□□□□ -0.41
Trbv30A0A0B4J1P1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms