Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Gm13836-201ENSMUST00000121159 501 ntBASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Gm10566-201ENSMUST00000086739 996 ntBASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav6-4A0A075B6B4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Gm21559-201ENSMUST00000220638 855 ntBASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Gm8587-201ENSMUST00000076538 843 ntBASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.74□□□□□ -0.37
Trav6-4A0A075B6B4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Gm18032-201ENSMUST00000222541 538 ntBASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav6-4A0A075B6B4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms