Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav17A0A075B655 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Gm37025-201ENSMUST00000195159 829 ntBASIC13.18□□□□□ -0.3
Trav17A0A075B655 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.18□□□□□ -0.3
Trav17A0A075B655 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav17A0A075B655 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav17A0A075B655 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Gm12933-201ENSMUST00000120203 872 ntBASIC13.16□□□□□ -0.3
Trav17A0A075B655 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.16□□□□□ -0.3
Trav17A0A075B655 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms