Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Gm15847-201ENSMUST00000121417 1065 ntBASIC12.84□□□□□ -0.35
Trav16A0A075B653 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.84□□□□□ -0.35
Trav16A0A075B653 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav16A0A075B653 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav16A0A075B653 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav16A0A075B653 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav16A0A075B653 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav16A0A075B653 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.83□□□□□ -0.35
Trav16A0A075B653 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Trav16A0A075B653 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Gm6576-201ENSMUST00000169678 883 ntBASIC12.83□□□□□ -0.36
Trav16A0A075B653 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Mtag2-201ENSMUST00000058665 714 ntBASIC12.83□□□□□ -0.36
Trav16A0A075B653 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav16A0A075B653 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Gm10138-203ENSMUST00000206952 366 ntBASIC12.82□□□□□ -0.36
Trav16A0A075B653 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trav16A0A075B653 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms