Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.37□□□□□ -1.23
ZC3H4Q9UPT8 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
ZC3H4Q9UPT8 AC093311.1-201ENST00000506586 2021 ntBASIC7.37□□□□□ -1.23
ZC3H4Q9UPT8 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
ZC3H4Q9UPT8 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.37□□□□□ -1.23
ZC3H4Q9UPT8 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.37□□□□□ -1.23
ZC3H4Q9UPT8 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
ZC3H4Q9UPT8 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
ZC3H4Q9UPT8 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 RNU6-657P-201ENST00000383904 107 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 Y_RNA.384-201ENST00000383909 102 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 MIR541-201ENST00000401360 84 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 MRPL42P2-201ENST00000403169 426 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 RNU6-1068P-201ENST00000410958 103 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AL139148.1-201ENST00000427122 680 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 OR51AB1P-201ENST00000429046 620 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 MTND3P2-201ENST00000438452 342 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AL772161.1-201ENST00000439130 476 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 RPL21P133-201ENST00000443666 476 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 GAPDHP23-201ENST00000444823 993 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 RPS17P15-201ENST00000475609 349 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 RPS15AP36-201ENST00000492022 382 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AC025674.1-201ENST00000507074 324 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AC090017.1-201ENST00000548612 1779 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AL355836.1-201ENST00000555951 870 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AL049872.1-201ENST00000556323 322 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AC009120.3-201ENST00000563335 499 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AC022884.3-201ENST00000579571 248 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AC097467.4-201ENST00000605504 141 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AC005618.1-201ENST00000606901 3148 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 RNU6-87P-201ENST00000607561 108 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 AL355802.3-201ENST00000607571 545 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 DISC2.1-201ENST00000612827 205 ntBASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ZC3H4Q9UPT8 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 AP000473.2-201ENST00000602659 1537 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 SNORA63C-201ENST00000364578 129 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 SNORA69-201ENST00000383895 132 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 MIR223-201ENST00000385204 110 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 MIR548P-201ENST00000408336 84 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 RNU2-8P-201ENST00000410727 190 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 MTATP6P18-201ENST00000417994 673 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 AC022022.1-201ENST00000430304 178 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 AC126120.1-201ENST00000431082 470 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 BNIP3P2-201ENST00000441221 577 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 AC016027.4-201ENST00000450866 277 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 Y_RNA.632-201ENST00000459189 102 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 RN7SL172P-201ENST00000460535 303 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 RN7SL583P-201ENST00000475692 287 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 RPS3AP50-201ENST00000487064 803 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 Vault.3-201ENST00000516676 95 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 TRMT10BP1-201ENST00000519377 943 ntBASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC7.35□□□□□ -1.23
ZC3H4Q9UPT8 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms