Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL160237.3-201ENST00000604114 1013 ntBASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 AC090525.3-201ENST00000605601 189 ntBASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 AC109809.1-201ENST00000619665 545 ntBASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 AC109454.4-201ENST00000623411 649 ntBASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 AC104985.3-201ENST00000623479 597 ntBASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 AL078595.3-201ENST00000623815 1166 ntBASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 LINC01808-202ENST00000641680 1116 ntBASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 AC018529.3-201ENST00000624212 2254 ntBASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 AC092435.4-201ENST00000623012 4159 ntBASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HDAC6Q9UBN7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 EOGT-210ENST00000615922 1931 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 ENSAP3-201ENST00000312710 333 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 RNU1-94P-201ENST00000362627 173 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 RNU1-130P-201ENST00000363930 160 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 SNORD65C-201ENST00000390962 71 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 HMGB3P18-201ENST00000406327 590 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 RN7SKP167-201ENST00000411047 285 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC009237.10-201ENST00000414112 510 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 LINC01881-201ENST00000416103 412 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 MTND4P3-201ENST00000417829 541 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 RAD23BP1-201ENST00000421404 1227 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 NANOGP5-201ENST00000424456 877 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC011998.1-201ENST00000433403 117 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AP000936.3-201ENST00000438127 255 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 RN7SL98P-201ENST00000462271 300 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 UBA52P3-201ENST00000491303 382 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 MTCO1P35-201ENST00000515270 228 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 SNORA31.9-201ENST00000516429 84 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 RN7SKP265-201ENST00000516448 223 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 NDUFS5P6-201ENST00000529136 295 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AP002812.4-201ENST00000532139 286 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC087897.1-201ENST00000550134 156 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AL157392.4-201ENST00000609756 345 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 PART1_2.1-201ENST00000612397 250 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 MIR7973-1-201ENST00000614683 76 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC090017.1-201ENST00000548612 1779 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 AC017104.4-201ENST00000636283 1592 ntBASIC5.04□□□□□ -1.6
HDAC6Q9UBN7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 NSRP1P1-201ENST00000444067 1693 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 AL121657.1-201ENST00000327215 531 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 SNORA70C-201ENST00000384538 135 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 HDGFP1-201ENST00000405943 252 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 AC004448.2-201ENST00000422360 586 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 IPMKP1-201ENST00000425988 855 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 RPS24P8-201ENST00000431490 402 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 PTGES3P1-201ENST00000439531 483 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 PHBP16-201ENST00000446318 950 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 AC104651.2-201ENST00000447549 528 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 AL009048.1-201ENST00000450437 298 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 AC098862.1-201ENST00000504991 413 ntBASIC5.03□□□□□ -1.6
HDAC6Q9UBN7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms