Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC109780.1-201ENST00000451768 1344 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 AC107982.1-201ENST00000507171 1300 ntBASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.88□□□□□ -1.63
AMBRA1Q9C0C7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC097461.1-201ENST00000568928 2821 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC006210.2-201ENST00000367074 1545 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC027514.1-201ENST00000588561 1603 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AL512646.1-201ENST00000269395 1077 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AL359643.1-201ENST00000404109 423 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 RNU2-16P-201ENST00000410712 136 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC068533.2-201ENST00000411872 306 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 ELOCP17-201ENST00000414751 326 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 CDK8P2-201ENST00000415020 547 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 RPL23AP39-201ENST00000415533 405 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC012075.1-201ENST00000436549 580 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 RPL7AP61-201ENST00000443410 636 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 H2AFZP6-201ENST00000444403 394 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 GAPDHP25-201ENST00000447061 1001 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 BX842559.2-201ENST00000451418 605 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 OR6C5P-201ENST00000452388 923 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 HMGB1P4-201ENST00000455362 567 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC079168.1-201ENST00000458741 345 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 RNA5SP103-201ENST00000459503 118 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 SRRM1P2-201ENST00000464531 1192 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 RPL7P38-201ENST00000488396 739 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC010285.3-201ENST00000511668 676 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC008562.1-201ENST00000521763 330 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC107982.3-201ENST00000584957 985 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 VN1R84P-201ENST00000593697 235 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AP003465.2-201ENST00000602571 373 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AL136363.2-201ENST00000604173 851 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC009597.2-201ENST00000604659 592 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC239868.4-201ENST00000608318 671 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC010678.1-201ENST00000614118 713 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC234782.5-201ENST00000617723 324 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 MIR6837-201ENST00000620884 64 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 AC092192.1-201ENST00000633154 1018 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 DBF4P1-201ENST00000412976 1892 ntBASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.87□□□□□ -1.63
AMBRA1Q9C0C7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AL121657.1-201ENST00000327215 531 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 Y_RNA.3-201ENST00000362331 103 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 AL133388.1-201ENST00000404509 287 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 MIR1271-201ENST00000408537 86 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 RNU6-272P-201ENST00000411028 104 ntBASIC4.86□□□□□ -1.63
AMBRA1Q9C0C7 RNU2-6P-201ENST00000411404 190 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms