Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC006517.1-201ENST00000480485 328 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 VN1R92P-201ENST00000598511 928 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 AP003392.5-201ENST00000607857 415 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 AC103710.3-201ENST00000608157 948 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 FP325313.1-201ENST00000638228 703 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM4Q9C037 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.09□□□□□ -1.76
TRIM4Q9C037 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
TRIM4Q9C037 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM4Q9C037 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM4Q9C037 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
TRIM4Q9C037 PRO1804-201ENST00000623780 2050 ntBASIC4.09□□□□□ -1.76
TRIM4Q9C037 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
TRIM4Q9C037 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM4Q9C037 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM4Q9C037 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM4Q9C037 AL161909.1-201ENST00000397390 712 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 COX6CP15-201ENST00000426313 211 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 AL035246.1-201ENST00000433554 1255 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 RPL7P48-201ENST00000461513 746 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 RPL35AP15-201ENST00000468042 339 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 AC104164.2-201ENST00000496953 495 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM4Q9C037 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM4Q9C037 RNA5SP73-201ENST00000516744 108 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 RNU6-943P-201ENST00000516960 98 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 TRAV8-5-201ENST00000537369 341 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 MIR5047-201ENST00000579212 100 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 AC022146.1-201ENST00000595307 847 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 AL354984.3-201ENST00000604803 325 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 AC012442.3-202ENST00000636742 206 ntBASIC4.08□□□□□ -1.76
TRIM4Q9C037 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TRIM4Q9C037 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM4Q9C037 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM4Q9C037 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM4Q9C037 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AL136964.1-201ENST00000622038 2990 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM4Q9C037 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 U1.1-201ENST00000384101 164 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 MIR634-201ENST00000385208 97 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 AL035696.2-201ENST00000407941 709 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC068533.1-201ENST00000418542 415 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 PTP4A1P5-201ENST00000420305 455 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC104978.1-201ENST00000449387 391 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 RPL7P22-201ENST00000466005 733 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC108145.1-201ENST00000503770 153 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 RN7SKP157-201ENST00000516174 282 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 TRMT10BP1-201ENST00000519377 943 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 PDCL2P2-201ENST00000533651 189 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM4Q9C037 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 MIR3186-201ENST00000577404 85 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC068020.1-201ENST00000594215 661 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 AL357559.1-201ENST00000622228 274 ntBASIC4.07□□□□□ -1.76
TRIM4Q9C037 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM4Q9C037 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms