Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC090819.1-201ENST00000523800 1111 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC137768.1-201ENST00000549998 553 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AL136520.1-202ENST00000555494 763 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 PSMB7P1-201ENST00000556349 514 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC104229.1-201ENST00000561364 255 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 MTND4LP25-201ENST00000570218 163 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC092574.1-201ENST00000609771 420 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC110792.4-201ENST00000609843 298 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 RN7SL722P-201ENST00000617780 284 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 RN7SL565P-201ENST00000618246 284 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC024023.1-201ENST00000624530 922 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AP000843.1-201ENST00000624880 701 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 OR5BE1P-202ENST00000641168 1176 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC027287.1-201ENST00000553115 1453 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 MIR383-201ENST00000362257 73 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 RNA5SP502-201ENST00000362694 119 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 RNA5SP509-201ENST00000364577 119 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 RNU6-650P-201ENST00000365658 111 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 HMGB1P10-201ENST00000395823 563 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AL133270.1-201ENST00000402635 279 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 RN7SKP56-201ENST00000410513 331 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 TCEA1P4-201ENST00000415066 844 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 RBMY2KP-201ENST00000418221 992 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 PNRC2P1-201ENST00000423940 420 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 VN1R42P-201ENST00000424651 344 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 CNOT7P1-201ENST00000429006 852 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 RPL12P46-201ENST00000436610 195 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 ACTR3P2-201ENST00000439585 1257 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 MED6P1-201ENST00000439659 713 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AL500522.2-201ENST00000448562 343 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AL162388.1-201ENST00000450912 352 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 FABP3P2-201ENST00000453169 399 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 RNU7-27P-201ENST00000459281 62 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 NARSP2-201ENST00000518524 679 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC051619.2-201ENST00000559063 397 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC106785.3-201ENST00000564064 847 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC018552.3-201ENST00000567416 561 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC106734.1-201ENST00000568646 663 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC005191.1-201ENST00000603950 358 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 OR2BH1P-201ENST00000608850 864 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AP000346.3-201ENST00000622821 210 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC010435.1-201ENST00000623353 1177 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 AC011944.2-201ENST00000624440 683 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 NCAPGP1-201ENST00000505112 1814 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 MFSD8-213ENST00000641134 1327 ntBASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HDHD3Q9BSH5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
HDHD3Q9BSH5 LARP1BP1-201ENST00000506036 1359 ntBASIC3.34□□□□□ -1.88
HDHD3Q9BSH5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
HDHD3Q9BSH5 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.34□□□□□ -1.88
HDHD3Q9BSH5 AP000756.2-201ENST00000624168 2567 ntBASIC3.34□□□□□ -1.88
HDHD3Q9BSH5 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.34□□□□□ -1.88
HDHD3Q9BSH5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HDHD3Q9BSH5 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms