Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 MIR1183-201ENST00000408856 89 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX3Q99909 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX3Q99909 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSX3Q99909 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX3Q99909 AC115285.1-201ENST00000424879 736 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX3Q99909 AC234779.1-201ENST00000425910 285 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AC007559.1-201ENST00000428736 355 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 OR2B7P-201ENST00000429302 934 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AC093414.1-201ENST00000434712 514 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 RPL23AP33-201ENST00000442301 452 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX3Q99909 RNF2P1-201ENST00000442955 1010 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSX3Q99909 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSX3Q99909 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX3Q99909 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX3Q99909 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX3Q99909 CDC42P1-201ENST00000456658 548 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AL133477.1-201ENST00000457472 514 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX3Q99909 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX3Q99909 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSX3Q99909 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX3Q99909 OR7H2P-201ENST00000513483 306 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.95□□□□□ -1.78
SSX3Q99909 MORF4L1P3-201ENST00000525966 950 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX3Q99909 MTND5P21-201ENST00000531961 522 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX3Q99909 AC092851.1-201ENST00000535964 478 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX3Q99909 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.95□□□□□ -1.78
SSX3Q99909 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX3Q99909 CYP2C60P-201ENST00000566088 139 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 UBE2FP2-201ENST00000566646 462 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 MIR4270-201ENST00000581799 70 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 MIR4737-201ENST00000583979 81 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX3Q99909 VN1R79P-201ENST00000593540 513 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AC008687.2-201ENST00000597865 520 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX3Q99909 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX3Q99909 AC124016.2-201ENST00000610058 665 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 MIR6820-201ENST00000611508 62 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AL353726.1-201ENST00000614041 1000 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 uc_338.32-201ENST00000615087 172 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX3Q99909 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AC022079.2-201ENST00000619739 566 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AC007275.1-201ENST00000621243 671 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX3Q99909 AC010872.1-201ENST00000624225 675 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.95□□□□□ -1.78
SSX3Q99909 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX3Q99909 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SSX3Q99909 EOGT-210ENST00000615922 1931 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.95□□□□□ -1.78
SSX3Q99909 MARK2P15-201ENST00000432204 2186 ntBASIC3.95□□□□□ -1.78
SSX3Q99909 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSX3Q99909 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.94□□□□□ -1.78
SSX3Q99909 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSX3Q99909 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
SSX3Q99909 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSX3Q99909 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX3Q99909 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSX3Q99909 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSX3Q99909 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.94□□□□□ -1.78
SSX3Q99909 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSX3Q99909 RNA5SP167-201ENST00000365461 116 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 MIR93-201ENST00000385024 80 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 RNA5SP113-201ENST00000410486 84 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX3Q99909 TBCAP2-201ENST00000416175 326 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 FAR2P4-202ENST00000425399 584 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX3Q99909 NANOGP6-201ENST00000429190 847 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 SEPT14P24-201ENST00000447236 180 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 HMGN2P21-201ENST00000447764 270 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 RPL5P32-201ENST00000454085 879 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 RPL23AP56-201ENST00000460778 453 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 AC015724.1-201ENST00000478577 156 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 GAPDHP36-201ENST00000480688 918 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 AC007686.1-201ENST00000488511 463 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSX3Q99909 AC093801.2-201ENST00000503966 1050 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.94□□□□□ -1.78
SSX3Q99909 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX3Q99909 HIGD1AP3-201ENST00000515857 278 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 RNU4-60P-201ENST00000517239 135 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 IGJP1-201ENST00000522682 475 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX3Q99909 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.94□□□□□ -1.78
SSX3Q99909 MIR4504-201ENST00000577413 92 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 AC091042.1-201ENST00000579213 173 ntBASIC3.94□□□□□ -1.78
SSX3Q99909 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX3Q99909 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSX3Q99909 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms