Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC007738.1-201ENST00000413892 348 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 USP9YP35-201ENST00000435696 412 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC245028.2-201ENST00000458673 253 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 RPS17P2-201ENST00000461663 408 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 RN7SL329P-201ENST00000467740 299 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 SETP11-201ENST00000473027 690 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 HMGN2P25-201ENST00000486956 268 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC004453.1-201ENST00000487895 408 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 RPL32P9-201ENST00000487963 407 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 RPL7P38-201ENST00000488396 739 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC073073.1-201ENST00000493920 463 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 RPL7L1P13-201ENST00000511702 739 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AF279873.1-201ENST00000523393 313 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC092490.3-201ENST00000545370 572 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AL512347.1-201ENST00000566420 503 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 ROCK1P1-201ENST00000573767 549 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC008759.1-201ENST00000589783 983 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AL139286.2-201ENST00000606838 396 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AL355816.1-201ENST00000607951 118 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC092650.2-201ENST00000619984 902 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC068870.2-201ENST00000620635 389 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC015804.1-201ENST00000622935 435 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AP000648.2-201ENST00000624182 404 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC116563.2-201ENST00000624751 535 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC026634.1-201ENST00000634369 198 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC084035.1-201ENST00000634543 607 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC099063.3-201ENST00000642066 185 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC004817.4-201ENST00000602396 3625 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 MAPK10-328ENST00000641553 4009 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC025125.1-201ENST00000624743 1922 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 Y_RNA.25-201ENST00000362528 102 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 RNA5SP305-201ENST00000362665 119 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 Y_RNA.559-201ENST00000384686 107 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 VDAC2P1-201ENST00000399358 958 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 MTCO3P1-205ENST00000422088 832 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL353706.1-201ENST00000436728 494 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC241584.1-201ENST00000438469 1241 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 MTND1P34-201ENST00000438556 671 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 RPL34P20-201ENST00000442771 351 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 OR7E125P-201ENST00000443450 846 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 RPL36AP33-201ENST00000450395 310 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 IGHV5-78-201ENST00000450948 295 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 RPL7AP6-201ENST00000477943 801 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC109462.1-201ENST00000491087 368 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AL024509.2-201ENST00000493462 493 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 AC023424.1-201ENST00000496058 459 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 RN7SL808P-201ENST00000496066 299 ntBASIC4.7□□□□□ -1.66
CTHRC1Q96CG8 COX6B1P5-201ENST00000509843 249 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms