Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 MTND4P9-201ENST00000507819 1346 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFT1Q96AA3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFT1Q96AA3 MFSD8-220ENST00000641243 1422 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFT1Q96AA3 RNA5SP507-201ENST00000363603 121 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 RNU6-236P-201ENST00000363886 106 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 RNA5SP151-201ENST00000365632 117 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFT1Q96AA3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFT1Q96AA3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFT1Q96AA3 RNU2-21P-201ENST00000410368 188 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 RN7SKP229-201ENST00000410465 302 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 RNU6-272P-201ENST00000411028 104 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AL591848.1-201ENST00000413092 322 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 PAICSP7-201ENST00000419829 962 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AL391219.1-201ENST00000422570 483 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 ELOCP18-201ENST00000434209 337 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC004865.1-201ENST00000442276 1003 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 RNF2P1-201ENST00000442955 1010 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 AL592437.1-201ENST00000443781 492 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 OR52J1P-201ENST00000450596 932 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC018635.1-201ENST00000468292 1030 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC091959.2-201ENST00000477363 321 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 RN7SL808P-201ENST00000496066 299 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC008427.1-201ENST00000503102 655 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 GAPDHP56-201ENST00000506031 988 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 RPL7L1P13-201ENST00000511702 739 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC004217.3-201ENST00000551552 878 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 SERPINE4P-201ENST00000554978 281 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 RPAP2P1-201ENST00000603626 1168 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 RNU6-1192P-201ENST00000612197 107 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 MIR6862-1-201ENST00000613016 70 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AL512624.1-201ENST00000613638 469 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 MIR6862-2-201ENST00000614755 70 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 RNU6-489P-201ENST00000618289 107 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 MIR6886-201ENST00000619864 61 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFT1Q96AA3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RFT1Q96AA3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.99□□□□□ -1.77
RFT1Q96AA3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RFT1Q96AA3 MTND4P8-201ENST00000514997 1362 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 ERCC6-202ENST00000374127 1782 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 AL391684.1-202ENST00000641293 1636 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 CASC19-261ENST00000641853 1638 ntBASIC3.99□□□□□ -1.77
RFT1Q96AA3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFT1Q96AA3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFT1Q96AA3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFT1Q96AA3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 MIR16-1-201ENST00000385271 89 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC096533.1-201ENST00000411645 353 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 OR51A3P-201ENST00000413596 924 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 PSMD10P3-201ENST00000437000 448 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 OR1H1P-201ENST00000448731 937 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 FABP3P2-201ENST00000453169 399 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 RPL5P32-201ENST00000454085 879 ntBASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.98□□□□□ -1.77
RFT1Q96AA3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RFT1Q96AA3 AC139783.2-201ENST00000504847 1145 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms