Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AP002001.2-201ENST00000529025 1469 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AL121839.2-201ENST00000565058 6943 ntBASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ALMS1Q8TCU4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 MIR513A2-201ENST00000385249 127 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 RBMY1KP-201ENST00000423480 476 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 PRELID3BP10-201ENST00000431957 584 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AC002553.2-201ENST00000453217 340 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 UBE2NP1-201ENST00000545592 458 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 SMCR2_2.1-201ENST00000619783 161 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 OR10J6P-201ENST00000289731 930 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 NANOGP6-201ENST00000429190 847 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 VN1R25P-201ENST00000443385 738 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AC073522.1-201ENST00000483312 377 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 TCP11X3P-202ENST00000514289 1254 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AL606834.2-201ENST00000602954 668 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AC135507.2-201ENST00000612443 309 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AC007998.5-201ENST00000622938 237 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AC244258.1-201ENST00000637553 1071 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 SNORD9-201ENST00000362566 104 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 SNORD74.4-201ENST00000364129 80 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 UBE2V1P2-201ENST00000397758 440 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AL136131.1-201ENST00000406079 803 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 CREM-226ENST00000469949 721 ntTSL 3 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AC010342.1-201ENST00000514047 877 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AL354976.1-201ENST00000613843 387 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AC119674.1-212ENST00000641155 993 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 AC005005.4-201ENST00000623789 16698 ntBASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
ALMS1Q8TCU4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AL034403.1-201ENST00000399414 885 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 ARL4AP3-201ENST00000441452 574 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 GEMIN8P3-201ENST00000445417 720 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AL360157.1-201ENST00000565962 87 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 DBIP2-201ENST00000419076 262 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 RPL23AP69-201ENST00000431134 458 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AC138409.2-202ENST00000507274 458 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AC008802.1-201ENST00000519121 791 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 OR7E13P-201ENST00000526052 910 ntBASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.5□□□□□ -2.01
ALMS1Q8TCU4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms