Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 HSFY6P-201ENST00000445573 403 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 UBE2V2P4-201ENST00000447495 259 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 ARL2BPP6-201ENST00000512757 439 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AC026402.1-201ENST00000513642 170 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AC087369.1-201ENST00000520775 996 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AC008489.1-201ENST00000524271 483 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 FAM106CP-201ENST00000582212 507 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 SNX6P1-201ENST00000601728 1224 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AL137849.1-201ENST00000604767 169 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AC015849.6-201ENST00000605454 474 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AC017076.1-201ENST00000607613 578 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AC034229.5-201ENST00000624258 185 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 AC090506.2-201ENST00000624521 419 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 MIR492-201ENST00000638676 116 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 OR5BE1P-202ENST00000641168 1176 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 BX005019.1-201ENST00000561881 1810 ntBASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC112Q8NEF3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.21□□□□□ -1.73
CCDC112Q8NEF3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCDC112Q8NEF3 AC022893.2-201ENST00000564832 3296 ntBASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 RNU1-85P-201ENST00000364127 164 ntBASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AL159169.1-201ENST00000421119 127 ntBASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AC068305.1-201ENST00000497406 726 ntBASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 RN7SKP60-201ENST00000516985 239 ntBASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 HMGB1P23-201ENST00000518743 568 ntBASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 MIR1254-2-201ENST00000579553 63 ntBASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AC067959.1-201ENST00000604334 379 ntBASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 MIR8059-201ENST00000620427 81 ntBASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 AC100871.1-201ENST00000507871 1456 ntBASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.21□□□□□ -1.74
CCDC112Q8NEF3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 ASNSP1-204ENST00000641977 1664 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 MIR199A2-201ENST00000385289 110 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 IFNWP4-201ENST00000453148 294 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 S100A11P1-201ENST00000477525 312 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AL132838.2-201ENST00000492041 314 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 OR4A12P-201ENST00000530847 918 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AL139174.1-201ENST00000531489 886 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AC025884.1-201ENST00000556034 378 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AC110743.1-201ENST00000584870 478 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AC022146.1-201ENST00000595307 847 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AC096586.2-201ENST00000610260 441 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 MIR6868-201ENST00000611215 58 ntBASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC112Q8NEF3 AC106871.1-201ENST00000568324 3102 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms