Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNU6-709P-201ENST00000517257 104 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC025884.1-201ENST00000556034 378 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC091488.1-201ENST00000604239 660 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC021749.1-201ENST00000604322 607 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC013244.3-201ENST00000605614 388 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC091979.2-201ENST00000607514 214 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC009318.3-201ENST00000616916 503 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC010975.3-201ENST00000618727 978 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AP000648.2-201ENST00000624182 404 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
HERC6Q8IVU3 AC099786.3-201ENST00000565735 1410 ntBASIC5.06□□□□□ -1.6
HERC6Q8IVU3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC010300.1-201ENST00000600671 5134 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 RNU1-94P-201ENST00000362627 173 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 RNU1-87P-201ENST00000363727 170 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC011933.1-201ENST00000413334 321 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 RPL36AP36-201ENST00000418616 301 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 RPF2P1-201ENST00000424137 906 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC092648.1-201ENST00000425870 423 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AL451139.1-201ENST00000434718 346 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC116533.1-201ENST00000459748 321 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC034236.1-201ENST00000469891 373 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC015724.1-201ENST00000478577 156 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 RN7SL810P-201ENST00000493031 276 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC073073.1-201ENST00000493920 463 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC105031.1-201ENST00000518550 476 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 SERPINE4P-201ENST00000554978 281 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC044913.1-201ENST00000557200 430 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 IPO5P1-202ENST00000600039 287 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AP000238.1-201ENST00000608759 426 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AL078595.3-201ENST00000623815 1166 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC087821.2-201ENST00000637086 450 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC021242.1-201ENST00000507315 2035 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC114546.3-201ENST00000623582 1734 ntBASIC5.05□□□□□ -1.6
HERC6Q8IVU3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERC6Q8IVU3 AC108467.2-201ENST00000617640 1597 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC011447.7-201ENST00000624228 1590 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC021146.4-201ENST00000309229 279 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 UBBP2-201ENST00000376781 231 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 ATP5F1P2-201ENST00000398143 760 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 Z98745.1-201ENST00000402553 494 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 OR51A3P-201ENST00000413596 924 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 Z75741.2-201ENST00000417272 1167 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 MTCO2P17-201ENST00000424336 677 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 OR2AH1P-201ENST00000425717 928 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC092162.1-201ENST00000432828 434 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 RPS20P1-201ENST00000434853 354 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC004865.1-201ENST00000442276 1003 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 VN1R25P-201ENST00000443385 738 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AL589765.3-201ENST00000446084 462 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.04□□□□□ -1.6
HERC6Q8IVU3 ZNF886P-201ENST00000450781 723 ntBASIC5.04□□□□□ -1.6
HERC6Q8IVU3 AC233982.1-201ENST00000451247 436 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms