Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 AC015849.2-201ENST00000605738 409 ntBASIC4□□□□□ -1.77
SFT2D3Q587I9 AP003392.5-201ENST00000607857 415 ntBASIC4□□□□□ -1.77
SFT2D3Q587I9 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4□□□□□ -1.77
SFT2D3Q587I9 AC128687.2-201ENST00000609657 566 ntBASIC4□□□□□ -1.77
SFT2D3Q587I9 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4□□□□□ -1.77
SFT2D3Q587I9 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4□□□□□ -1.77
SFT2D3Q587I9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4□□□□□ -1.77
SFT2D3Q587I9 AC016717.3-201ENST00000624730 554 ntBASIC4□□□□□ -1.77
SFT2D3Q587I9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
SFT2D3Q587I9 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4□□□□□ -1.77
SFT2D3Q587I9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SFT2D3Q587I9 LARP1BP1-201ENST00000506036 1359 ntBASIC4□□□□□ -1.77
SFT2D3Q587I9 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SFT2D3Q587I9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4□□□□□ -1.77
SFT2D3Q587I9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SFT2D3Q587I9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 RNF6P1-201ENST00000444889 1784 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 GTF2H2B-203ENST00000508065 1432 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 MFSD8-220ENST00000641243 1422 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 Z73965.1-201ENST00000623412 2297 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AL121657.1-201ENST00000327215 531 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 SNORD115-48-201ENST00000364764 76 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 RNU6-883P-201ENST00000384597 107 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 RPS26P8-201ENST00000393490 348 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 RPL21P133-201ENST00000443666 476 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 RPL23AP81-201ENST00000455252 467 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AC023050.1-201ENST00000498198 304 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 RN7SKP141-201ENST00000516167 338 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 RNA5SP73-201ENST00000516744 108 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AP002812.4-201ENST00000532139 286 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 CBX3P2-202ENST00000583365 535 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AL161729.3-201ENST00000603533 673 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 FAM27D1-201ENST00000612308 341 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AC000123.2-201ENST00000623124 461 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AP003072.4-201ENST00000624580 310 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AL353743.4-201ENST00000422653 1547 ntBASIC3.99□□□□□ -1.77
SFT2D3Q587I9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SFT2D3Q587I9 AC006042.3-201ENST00000454684 1469 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 NCAPGP1-201ENST00000505112 1814 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 OR5T3-201ENST00000303059 1023 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 NPM1P10-201ENST00000398310 865 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 FABP12P1-201ENST00000401911 322 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 RPS20P25-201ENST00000412447 352 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 CR848007.2-201ENST00000424918 787 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AC004975.1-201ENST00000428733 208 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 FO393419.3-201ENST00000428741 282 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 IFNNP1-201ENST00000429219 553 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 COX6B1P7-201ENST00000430845 235 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 RPL7P31-201ENST00000450192 724 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 RN7SL93P-201ENST00000463035 293 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 RPL7P19-201ENST00000469948 618 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AC104687.1-201ENST00000485829 412 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 MTCO1P35-201ENST00000515270 228 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 TOMM20P2-201ENST00000540082 421 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AL109766.1-201ENST00000555080 552 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AC025884.1-201ENST00000556034 378 ntBASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.98□□□□□ -1.77
SFT2D3Q587I9 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms