Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 MFSD13B-201ENST00000420133 1290 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AL358176.3-201ENST00000420757 454 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 RPL7P44-201ENST00000424827 742 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 MTCO1P54-201ENST00000430139 712 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 ATP5F1P1-201ENST00000433775 569 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 UBE2D3P1-201ENST00000436669 444 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 OR52E3P-201ENST00000452083 936 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 RPL21P134-201ENST00000453468 483 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 snoU13.1-201ENST00000459157 104 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 RPS23P7-201ENST00000466210 444 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC010285.3-201ENST00000511668 676 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC117532.1-201ENST00000514638 323 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC008562.1-201ENST00000521763 330 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC004217.3-201ENST00000551552 878 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC008015.1-201ENST00000555505 465 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC087465.1-201ENST00000560574 245 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 NBR2-204ENST00000587322 63 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AL031281.1-201ENST00000604049 488 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AP004247.3-201ENST00000608682 624 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AL139418.1-201ENST00000613613 177 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC068792.1-201ENST00000621354 417 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 ASNSP1-204ENST00000641977 1664 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 AC009313.2-201ENST00000417893 1941 ntBASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.23□□□□□ -1.57
SLC44A4Q53GD3 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 RNA5SP191-201ENST00000362585 102 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 SNORD116-9-201ENST00000384000 95 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 SNORD116-3-201ENST00000384287 95 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 SNORD116-7-201ENST00000384404 95 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 SNORD116-5-201ENST00000384462 95 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 Y_RNA.505-201ENST00000384489 102 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 SNORD116-4-201ENST00000384733 96 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 MIR217-201ENST00000384817 110 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 RPL7P11-201ENST00000437586 658 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 MTND3P1-201ENST00000441336 220 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 FHP1-201ENST00000442741 703 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AL589765.3-201ENST00000446084 462 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC245028.2-201ENST00000458673 253 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 RNU6-1218P-201ENST00000458990 108 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 AC108734.3-201ENST00000481241 1165 ntBASIC5.22□□□□□ -1.57
SLC44A4Q53GD3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms