Protein–RNA interactions for Protein: Q17RB0

RTL8B, Retrotransposon Gag-like protein 8B, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8BQ17RB0 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTL8BQ17RB0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.12□□□□□ -1.91
RTL8BQ17RB0 AC006504.1-201ENST00000562493 3666 ntBASIC3.12□□□□□ -1.91
RTL8BQ17RB0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 Z98941.1-201ENST00000407764 100 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 MTCO3P21-201ENST00000430791 643 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC005229.2-201ENST00000456995 399 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 RPL7P19-201ENST00000469948 618 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC087385.1-201ENST00000475062 312 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 NIPA2P2-201ENST00000496376 1083 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC108941.1-201ENST00000502853 530 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 HAUS1P1-201ENST00000505275 832 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 TOMM20P2-201ENST00000540082 421 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AP005901.4-201ENST00000577336 569 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 MIR4644-201ENST00000579929 84 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC069366.1-201ENST00000583159 838 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC005255.1-201ENST00000593748 216 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 Z82195.1-201ENST00000604558 398 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC034236.3-201ENST00000605999 461 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC010857.1-201ENST00000606398 594 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AL023583.1-201ENST00000607518 1143 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AL445423.1-201ENST00000609941 536 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC005962.2-201ENST00000611427 652 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 MIR6500-201ENST00000622700 86 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTL8BQ17RB0 RLIMP1-201ENST00000339626 1680 ntBASIC3.11□□□□□ -1.91
RTL8BQ17RB0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 U3.15-201ENST00000365398 212 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 ST13P16-201ENST00000401760 781 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AL356095.1-201ENST00000417217 199 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 RPS26P40-201ENST00000435209 294 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 VN1R96P-201ENST00000446052 858 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AC114755.5-201ENST00000447760 831 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 RPS23P7-201ENST00000466210 444 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 NDUFA5P9-201ENST00000472609 340 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AC084198.1-201ENST00000477747 402 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AC108471.1-201ENST00000513977 287 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 RN7SKP83-201ENST00000516512 178 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AC020910.2-201ENST00000603635 610 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AL049844.2-201ENST00000604280 628 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AL163642.2-201ENST00000604722 1019 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 U7.8-201ENST00000619968 63 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 EXOC5P1-201ENST00000510543 1969 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 CR381670.1-201ENST00000624291 1693 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 PRO1804-201ENST00000623780 2050 ntBASIC3.1□□□□□ -1.91
RTL8BQ17RB0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
RTL8BQ17RB0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.09□□□□□ -1.91
RTL8BQ17RB0 AC017002.4-201ENST00000604721 1525 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms