Protein–RNA interactions for Protein: Q15431

SYCP1, Synaptonemal complex protein 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1Q15431 RPL23AP38-201ENST00000423801 469 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SYCP1Q15431 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.39□□□□□ -1.71
SYCP1Q15431 FCF1P7-201ENST00000451185 558 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.39□□□□□ -1.71
SYCP1Q15431 AL136097.1-201ENST00000456945 913 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 AC021205.1-201ENST00000468797 348 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.39□□□□□ -1.71
SYCP1Q15431 AC108475.1-201ENST00000507880 950 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYCP1Q15431 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.39□□□□□ -1.71
SYCP1Q15431 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.39□□□□□ -1.71
SYCP1Q15431 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.39□□□□□ -1.71
SYCP1Q15431 MIR4277-201ENST00000578298 84 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.39□□□□□ -1.71
SYCP1Q15431 AC016717.3-201ENST00000624730 554 ntBASIC4.39□□□□□ -1.71
SYCP1Q15431 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.39□□□□□ -1.71
SYCP1Q15431 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SYCP1Q15431 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
SYCP1Q15431 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYCP1Q15431 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
SYCP1Q15431 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYCP1Q15431 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.39□□□□□ -1.71
SYCP1Q15431 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYCP1Q15431 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYCP1Q15431 RPL32P3-201ENST00000359025 275 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.38□□□□□ -1.71
SYCP1Q15431 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SYCP1Q15431 RN7SKP285-201ENST00000410137 318 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 RPL23AP26-201ENST00000412728 464 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.38□□□□□ -1.71
SYCP1Q15431 USP9YP7-201ENST00000436723 430 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.38□□□□□ -1.71
SYCP1Q15431 AC245517.2-201ENST00000442890 346 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 RPS4XP4-201ENST00000443195 763 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.38□□□□□ -1.71
SYCP1Q15431 USP9YP32-201ENST00000452432 430 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.38□□□□□ -1.71
SYCP1Q15431 RPL38P1-201ENST00000460914 211 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 RN7SL271P-201ENST00000487601 295 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.38□□□□□ -1.71
SYCP1Q15431 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.38□□□□□ -1.71
SYCP1Q15431 SNORA70.14-201ENST00000516205 110 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.38□□□□□ -1.71
SYCP1Q15431 AC009643.1-201ENST00000532030 391 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 PARP1P2-201ENST00000556806 195 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 MIR5096-201ENST00000583713 70 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.38□□□□□ -1.71
SYCP1Q15431 AC068790.4-201ENST00000602474 263 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 AL133247.2-201ENST00000603236 482 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 AL390816.3-201ENST00000604527 1066 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 AC010680.4-201ENST00000605334 543 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 AL591424.2-201ENST00000617023 128 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 AL121890.3-201ENST00000618494 516 ntBASIC4.38□□□□□ -1.71
SYCP1Q15431 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.38□□□□□ -1.71
SYCP1Q15431 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SYCP1Q15431 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SYCP1Q15431 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SYCP1Q15431 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SYCP1Q15431 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SYCP1Q15431 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SYCP1Q15431 AC138393.1-206ENST00000540997 1886 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYCP1Q15431 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYCP1Q15431 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYCP1Q15431 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYCP1Q15431 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
SYCP1Q15431 AL590704.1-201ENST00000402856 794 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.37□□□□□ -1.71
SYCP1Q15431 AL590806.1-201ENST00000415818 853 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 AC108032.1-201ENST00000416706 207 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SYCP1Q15431 AC023141.6-201ENST00000429418 337 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 RPS29P31-201ENST00000446147 164 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 RAB28P3-201ENST00000448325 597 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 RNU7-170P-201ENST00000459303 61 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 UQCRHP4-201ENST00000471686 272 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 AC007537.2-201ENST00000472093 511 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
SYCP1Q15431 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.37□□□□□ -1.71
SYCP1Q15431 AC026784.1-201ENST00000507986 352 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.37□□□□□ -1.71
SYCP1Q15431 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.37□□□□□ -1.71
SYCP1Q15431 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.37□□□□□ -1.71
SYCP1Q15431 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SYCP1Q15431 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.37□□□□□ -1.71
SYCP1Q15431 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.37□□□□□ -1.71
SYCP1Q15431 AC011477.5-201ENST00000586571 259 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.37□□□□□ -1.71
SYCP1Q15431 AL365503.1-201ENST00000605247 905 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 AC023043.4-201ENST00000612081 449 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 AC114781.5-201ENST00000615297 108 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.37□□□□□ -1.71
SYCP1Q15431 AC011944.2-201ENST00000624440 683 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 LARP1BP1-201ENST00000506036 1359 ntBASIC4.37□□□□□ -1.71
SYCP1Q15431 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SYCP1Q15431 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SYCP1Q15431 CEP170P1-201ENST00000502249 4587 ntBASIC4.36□□□□□ -1.71
SYCP1Q15431 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms