Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC105272.1-201ENST00000438604 198 ntBASIC2.55□□□□□ -2
PRKDCP78527 CREM-238ENST00000488741 651 ntTSL 2 BASIC2.55□□□□□ -2
PRKDCP78527 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC2.55□□□□□ -2
PRKDCP78527 GTF3AP2-201ENST00000557014 266 ntBASIC2.55□□□□□ -2
PRKDCP78527 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.55□□□□□ -2
PRKDCP78527 OR51C1P-201ENST00000608504 942 ntBASIC2.55□□□□□ -2
PRKDCP78527 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.55□□□□□ -2
PRKDCP78527 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.55□□□□□ -2
PRKDCP78527 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
PRKDCP78527 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC2.55□□□□□ -2
PRKDCP78527 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.55□□□□□ -2
PRKDCP78527 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC2.55□□□□□ -2
PRKDCP78527 Y_RNA.466-201ENST00000384294 113 ntBASIC2.55□□□□□ -2
PRKDCP78527 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.55□□□□□ -2
PRKDCP78527 U3.44-201ENST00000458938 192 ntBASIC2.55□□□□□ -2
PRKDCP78527 AP003355.3-201ENST00000623465 114 ntBASIC2.55□□□□□ -2
PRKDCP78527 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.55□□□□□ -2
PRKDCP78527 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRKDCP78527 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
PRKDCP78527 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
PRKDCP78527 AC118273.1-201ENST00000525324 3006 ntBASIC2.54□□□□□ -2
PRKDCP78527 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.54□□□□□ -2
PRKDCP78527 AC239809.1-201ENST00000450470 217 ntBASIC2.54□□□□□ -2
PRKDCP78527 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC2.54□□□□□ -2
PRKDCP78527 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.54□□□□□ -2
PRKDCP78527 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 AL645568.2-201ENST00000432815 1337 ntBASIC2.54□□□□□ -2
PRKDCP78527 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
PRKDCP78527 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PRKDCP78527 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.54□□□□□ -2
PRKDCP78527 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
PRKDCP78527 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PRKDCP78527 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
PRKDCP78527 OR2AH1P-201ENST00000425717 928 ntBASIC2.54□□□□□ -2
PRKDCP78527 TPTE2P3-201ENST00000441562 1189 ntBASIC2.54□□□□□ -2
PRKDCP78527 ATP5C1P1-201ENST00000441945 895 ntBASIC2.54□□□□□ -2
PRKDCP78527 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC2.54□□□□□ -2
PRKDCP78527 AC100770.1-201ENST00000532310 322 ntBASIC2.54□□□□□ -2
PRKDCP78527 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.54□□□□□ -2
PRKDCP78527 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
PRKDCP78527 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC2.54□□□□□ -2
PRKDCP78527 HSPA8P19-201ENST00000505359 1517 ntBASIC2.54□□□□□ -2
PRKDCP78527 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
PRKDCP78527 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC2.53□□□□□ -2
PRKDCP78527 U3.12-201ENST00000364498 214 ntBASIC2.53□□□□□ -2
PRKDCP78527 SNORA70B-201ENST00000384210 135 ntBASIC2.53□□□□□ -2
PRKDCP78527 MIR504-201ENST00000385065 83 ntBASIC2.53□□□□□ -2
PRKDCP78527 U3.19-201ENST00000390893 196 ntBASIC2.53□□□□□ -2
PRKDCP78527 RNA5SP229-201ENST00000410809 99 ntBASIC2.53□□□□□ -2
PRKDCP78527 RPL6P21-201ENST00000418672 846 ntBASIC2.53□□□□□ -2
PRKDCP78527 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC2.53□□□□□ -2
PRKDCP78527 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.53□□□□□ -2
PRKDCP78527 AL133477.1-201ENST00000457472 514 ntBASIC2.53□□□□□ -2
PRKDCP78527 RNU6-991P-201ENST00000516168 107 ntBASIC2.53□□□□□ -2
PRKDCP78527 AC008011.1-201ENST00000545989 227 ntBASIC2.53□□□□□ -2
PRKDCP78527 AP003485.2-201ENST00000623636 610 ntBASIC2.53□□□□□ -2
PRKDCP78527 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PRKDCP78527 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PRKDCP78527 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC2.53□□□□□ -2
PRKDCP78527 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.53□□□□□ -2
PRKDCP78527 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC2.53□□□□□ -2
PRKDCP78527 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC2.53□□□□□ -2
PRKDCP78527 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.53□□□□□ -2
PRKDCP78527 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC2.53□□□□□ -2
PRKDCP78527 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC2.53□□□□□ -2
PRKDCP78527 RPS17P11-201ENST00000474297 293 ntBASIC2.53□□□□□ -2
PRKDCP78527 AC109925.1-201ENST00000478069 331 ntBASIC2.53□□□□□ -2
PRKDCP78527 RPL7P47-201ENST00000497299 556 ntBASIC2.53□□□□□ -2
PRKDCP78527 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC2.53□□□□□ -2
PRKDCP78527 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.53□□□□□ -2
PRKDCP78527 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.53□□□□□ -2
PRKDCP78527 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.53□□□□□ -2
PRKDCP78527 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.53□□□□□ -2
PRKDCP78527 AC006557.5-201ENST00000603126 811 ntBASIC2.53□□□□□ -2
PRKDCP78527 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.53□□□□□ -2
PRKDCP78527 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.53□□□□□ -2
PRKDCP78527 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PRKDCP78527 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC2.53□□□□□ -2
PRKDCP78527 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
PRKDCP78527 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC2.53□□□□□ -2
PRKDCP78527 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PRKDCP78527 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
PRKDCP78527 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC2.53□□□□□ -2
PRKDCP78527 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC2.53□□□□□ -2
PRKDCP78527 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms