Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC090246.1-201ENST00000616499 426 ntBASIC3.31□□□□□ -1.88
SPCS3P61009 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.31□□□□□ -1.88
SPCS3P61009 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SPCS3P61009 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
SPCS3P61009 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SPCS3P61009 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPCS3P61009 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.3□□□□□ -1.88
SPCS3P61009 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPCS3P61009 IPO8P1-201ENST00000455509 3109 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SPCS3P61009 MIR1251-201ENST00000408552 70 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 FAR2P2-201ENST00000413041 594 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 XKRYP4-201ENST00000414395 483 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SPCS3P61009 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SPCS3P61009 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.3□□□□□ -1.88
SPCS3P61009 RPA2P2-201ENST00000419698 796 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 RPL31P12-201ENST00000422587 358 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 RPEP3-201ENST00000425462 676 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 TRIAP1P1-201ENST00000427062 225 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.3□□□□□ -1.88
SPCS3P61009 AL360081.1-201ENST00000428299 555 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.3□□□□□ -1.88
SPCS3P61009 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.3□□□□□ -1.88
SPCS3P61009 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.3□□□□□ -1.88
SPCS3P61009 AL353898.1-201ENST00000444055 238 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 XKRYP5-201ENST00000449659 483 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 AC109327.1-201ENST00000471666 403 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 RPL35P6-201ENST00000490024 372 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 RPS4XP14-201ENST00000493072 781 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 RPL29P14-201ENST00000495837 428 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.3□□□□□ -1.88
SPCS3P61009 RNU7-143P-201ENST00000516781 65 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.3□□□□□ -1.88
SPCS3P61009 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.3□□□□□ -1.88
SPCS3P61009 AC008011.1-201ENST00000545989 227 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 AC010198.2-201ENST00000550612 259 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.3□□□□□ -1.88
SPCS3P61009 MIR4436B2-201ENST00000581415 91 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 MIR4436B1-201ENST00000583272 91 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.3□□□□□ -1.88
SPCS3P61009 AL451044.1-201ENST00000604867 238 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 AC090948.1-201ENST00000607464 549 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 FAM25E-202ENST00000608562 189 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 RMST_8.1-201ENST00000610287 165 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 AC105429.2-201ENST00000610567 517 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.3□□□□□ -1.88
SPCS3P61009 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.3□□□□□ -1.88
SPCS3P61009 LINC00561-201ENST00000565815 2738 ntBASIC3.3□□□□□ -1.88
SPCS3P61009 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPCS3P61009 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPCS3P61009 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SPCS3P61009 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SPCS3P61009 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SPCS3P61009 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SPCS3P61009 MIR129-1-201ENST00000384972 72 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 SNORD65-201ENST00000391079 73 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 AC092642.1-201ENST00000392417 425 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 RPS3AP23-201ENST00000401762 784 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SPCS3P61009 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.29□□□□□ -1.88
SPCS3P61009 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.29□□□□□ -1.88
SPCS3P61009 MTCO1P43-201ENST00000431831 488 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 AL513533.1-201ENST00000453728 415 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 AC010307.1-201ENST00000467206 836 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.29□□□□□ -1.88
SPCS3P61009 AC074386.1-201ENST00000476560 767 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 RN7SL177P-201ENST00000476596 299 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.29□□□□□ -1.88
SPCS3P61009 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SPCS3P61009 RNA5SP49-201ENST00000516450 115 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 RNA5SP519-201ENST00000516480 119 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.29□□□□□ -1.88
SPCS3P61009 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.29□□□□□ -1.88
SPCS3P61009 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.29□□□□□ -1.88
SPCS3P61009 AC105233.3-201ENST00000531125 744 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.29□□□□□ -1.88
SPCS3P61009 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.29□□□□□ -1.88
SPCS3P61009 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.29□□□□□ -1.88
SPCS3P61009 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.29□□□□□ -1.88
SPCS3P61009 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SPCS3P61009 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.29□□□□□ -1.88
SPCS3P61009 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.29□□□□□ -1.88
SPCS3P61009 AC016877.3-201ENST00000606778 504 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 AL161616.1-201ENST00000611867 286 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 AL354950.1-201ENST00000614150 568 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 AC116563.2-201ENST00000624751 535 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.29□□□□□ -1.88
SPCS3P61009 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.29□□□□□ -1.88
SPCS3P61009 AC119674.1-212ENST00000641155 993 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SPCS3P61009 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.29□□□□□ -1.88
SPCS3P61009 MFSD8-236ENST00000641509 4050 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.29□□□□□ -1.88
SPCS3P61009 AL158163.1-201ENST00000603915 1649 ntBASIC3.29□□□□□ -1.88
SPCS3P61009 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SPCS3P61009 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.29□□□□□ -1.88
SPCS3P61009 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms