Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.82□□□□□ -1.64
HDAC4P56524 NDUFS5P6-201ENST00000529136 295 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.82□□□□□ -1.64
HDAC4P56524 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.82□□□□□ -1.64
HDAC4P56524 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.82□□□□□ -1.64
HDAC4P56524 AC137768.1-201ENST00000549998 553 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.82□□□□□ -1.64
HDAC4P56524 AC063949.1-201ENST00000552900 865 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.82□□□□□ -1.64
HDAC4P56524 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.82□□□□□ -1.64
HDAC4P56524 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.82□□□□□ -1.64
HDAC4P56524 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.82□□□□□ -1.64
HDAC4P56524 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.82□□□□□ -1.64
HDAC4P56524 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.82□□□□□ -1.64
HDAC4P56524 EIF1P6-201ENST00000600054 334 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 AC068790.7-201ENST00000602347 528 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 AC013468.1-201ENST00000608680 598 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 AC087683.2-201ENST00000611384 326 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 PART1_2.1-201ENST00000612397 250 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 AC079395.3-201ENST00000615161 484 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 AC123768.4-201ENST00000616244 701 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 AC006386.1-201ENST00000619436 415 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 AC004232.3-201ENST00000622977 525 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.82□□□□□ -1.64
HDAC4P56524 AL355852.1-201ENST00000454081 1771 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HDAC4P56524 MAPK10-303ENST00000641324 3959 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 AL391684.1-202ENST00000641293 1636 ntBASIC4.82□□□□□ -1.64
HDAC4P56524 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.82□□□□□ -1.64
HDAC4P56524 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HDAC4P56524 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.82□□□□□ -1.64
HDAC4P56524 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.81□□□□□ -1.64
HDAC4P56524 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HDAC4P56524 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 NSRP1P1-201ENST00000444067 1693 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.81□□□□□ -1.64
HDAC4P56524 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HDAC4P56524 RNU6-1339P-201ENST00000363574 91 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 MIR192-201ENST00000384915 110 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 MIR1303-201ENST00000408625 86 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 VPS26BP1-201ENST00000417155 755 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.81□□□□□ -1.64
HDAC4P56524 AC092634.2-201ENST00000428146 1010 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.81□□□□□ -1.64
HDAC4P56524 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.81□□□□□ -1.64
HDAC4P56524 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.81□□□□□ -1.64
HDAC4P56524 PTGES3P1-201ENST00000439531 483 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.81□□□□□ -1.64
HDAC4P56524 EEF1A1P1-201ENST00000447052 739 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 AC098826.2-201ENST00000452011 651 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 CDC42P1-201ENST00000456658 548 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 RPL12P20-201ENST00000475538 479 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 AC068587.2-201ENST00000478386 781 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 AC068587.1-201ENST00000483613 781 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 RPS4XP18-201ENST00000495480 763 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 MTND4LP2-201ENST00000502312 285 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 HPRT1P2-201ENST00000505250 544 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.81□□□□□ -1.64
HDAC4P56524 AC098799.3-201ENST00000506095 438 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.81□□□□□ -1.64
HDAC4P56524 AC007016.1-201ENST00000512110 244 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.81□□□□□ -1.64
HDAC4P56524 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.81□□□□□ -1.64
HDAC4P56524 OR8K4P-201ENST00000534608 872 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 LRRC34P1-201ENST00000542742 915 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 AC068446.3-201ENST00000555285 382 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.81□□□□□ -1.64
HDAC4P56524 AC090888.2-201ENST00000559765 1144 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.81□□□□□ -1.64
HDAC4P56524 AC090515.3-201ENST00000560431 315 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 CYP2C60P-201ENST00000566088 139 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.81□□□□□ -1.64
HDAC4P56524 AC027455.1-201ENST00000574104 594 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 RN7SL690P-201ENST00000582087 240 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.81□□□□□ -1.64
HDAC4P56524 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.81□□□□□ -1.64
HDAC4P56524 AC234782.5-201ENST00000617723 324 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 U3.53-201ENST00000628922 216 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 OR6C71P-202ENST00000641886 1107 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 AC092162.3-201ENST00000624511 1624 ntBASIC4.81□□□□□ -1.64
HDAC4P56524 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HDAC4P56524 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.81□□□□□ -1.64
HDAC4P56524 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HDAC4P56524 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC4P56524 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC4P56524 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.8□□□□□ -1.64
HDAC4P56524 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HDAC4P56524 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HDAC4P56524 AC108751.5-201ENST00000492880 1336 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms