Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 KATNBL1P6-201ENST00000453433 915 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 TAF9P2-201ENST00000454958 515 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 RN7SL814P-201ENST00000487715 300 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.81□□□□□ -1.64
SUMO3P55854 RNF138P1-201ENST00000502765 546 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.81□□□□□ -1.64
SUMO3P55854 AC007115.1-201ENST00000546853 234 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.81□□□□□ -1.64
SUMO3P55854 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.81□□□□□ -1.64
SUMO3P55854 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.81□□□□□ -1.64
SUMO3P55854 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.81□□□□□ -1.64
SUMO3P55854 AP005119.2-201ENST00000579735 1105 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 FKBP1AP1-201ENST00000594588 318 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.81□□□□□ -1.64
SUMO3P55854 AC069307.1-201ENST00000602820 447 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.81□□□□□ -1.64
SUMO3P55854 AC122108.2-201ENST00000611946 526 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 AC092192.1-201ENST00000633154 1018 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 U6.101-201ENST00000637707 76 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 FAM157B-203ENST00000639350 358 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SUMO3P55854 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SUMO3P55854 AC092747.4-201ENST00000620519 1861 ntBASIC4.81□□□□□ -1.64
SUMO3P55854 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SUMO3P55854 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SUMO3P55854 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.81□□□□□ -1.64
SUMO3P55854 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SUMO3P55854 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
SUMO3P55854 MUC2-202ENST00000613187 4845 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SUMO3P55854 AL592148.3-201ENST00000608771 2646 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SUMO3P55854 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SUMO3P55854 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.8□□□□□ -1.64
SUMO3P55854 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SUMO3P55854 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SUMO3P55854 AL034549.2-201ENST00000618285 3373 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 RNU6-433P-201ENST00000363216 104 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 RNU6-660P-201ENST00000364566 109 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SUMO3P55854 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SUMO3P55854 ARF4P3-201ENST00000397387 509 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 BTBD10P2-201ENST00000404779 676 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 OR4K12P-201ENST00000406538 961 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.8□□□□□ -1.64
SUMO3P55854 MIR1286-201ENST00000408112 78 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.8□□□□□ -1.64
SUMO3P55854 AL049610.1-201ENST00000423374 372 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SUMO3P55854 NPM1P34-201ENST00000428821 893 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.8□□□□□ -1.64
SUMO3P55854 CFL1P1-202ENST00000432948 411 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.8□□□□□ -1.64
SUMO3P55854 CLUHP1-201ENST00000435012 1190 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.8□□□□□ -1.64
SUMO3P55854 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.8□□□□□ -1.64
SUMO3P55854 PPIAP20-201ENST00000449839 135 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 RPL36AP33-201ENST00000450395 310 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 ZNF114P1-201ENST00000453500 292 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 Z92846.1-201ENST00000456203 268 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.8□□□□□ -1.64
SUMO3P55854 EIF3LP3-201ENST00000495197 822 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 RPL15P21-201ENST00000495592 567 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AC006499.5-201ENST00000505037 514 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.8□□□□□ -1.64
SUMO3P55854 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.8□□□□□ -1.64
SUMO3P55854 Y_RNA.655-201ENST00000515919 96 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.8□□□□□ -1.64
SUMO3P55854 AC012400.1-201ENST00000518452 381 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.8□□□□□ -1.64
SUMO3P55854 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.8□□□□□ -1.64
SUMO3P55854 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.8□□□□□ -1.64
SUMO3P55854 HSPA8P13-201ENST00000523715 472 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SUMO3P55854 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.8□□□□□ -1.64
SUMO3P55854 PSMB7P1-201ENST00000556349 514 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AL390334.1-201ENST00000556395 450 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.8□□□□□ -1.64
SUMO3P55854 RN7SL802P-201ENST00000577858 299 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 MIR3176-201ENST00000582210 90 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AC008507.1-201ENST00000587506 734 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.8□□□□□ -1.64
SUMO3P55854 AC008814.1-201ENST00000603797 406 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AC064872.1-201ENST00000604823 1072 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.8□□□□□ -1.64
SUMO3P55854 AL356596.1-201ENST00000624230 379 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.8□□□□□ -1.64
SUMO3P55854 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SUMO3P55854 AC093535.2-201ENST00000624769 2326 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SUMO3P55854 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SUMO3P55854 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
SUMO3P55854 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.8□□□□□ -1.64
SUMO3P55854 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SUMO3P55854 ASNSP1-201ENST00000518311 1939 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 AC130650.2-201ENST00000618736 2403 ntBASIC4.8□□□□□ -1.64
SUMO3P55854 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.8□□□□□ -1.64
SUMO3P55854 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SUMO3P55854 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SUMO3P55854 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms