Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH12P55289 SUMO2P15-201ENST00000604285 278 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AP003973.1-201ENST00000604639 691 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AC010424.2-201ENST00000607594 443 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AC131235.4-201ENST00000609288 620 ntBASIC4.43□□□□□ -1.7
CDH12P55289 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH12P55289 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AC079248.2-201ENST00000623779 326 ntBASIC4.43□□□□□ -1.7
CDH12P55289 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH12P55289 AC068620.4-201ENST00000636730 1182 ntBASIC4.43□□□□□ -1.7
CDH12P55289 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.43□□□□□ -1.7
CDH12P55289 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH12P55289 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH12P55289 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
CDH12P55289 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH12P55289 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH12P55289 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDH12P55289 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CDH12P55289 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
CDH12P55289 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AL136164.3-201ENST00000624429 3978 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AL590763.1-201ENST00000398297 1545 ntBASIC4.42□□□□□ -1.7
CDH12P55289 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 IL6STP1-201ENST00000346911 1020 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 RNU5A-2P-201ENST00000384337 116 ntBASIC4.42□□□□□ -1.7
CDH12P55289 SNORA70-201ENST00000384436 135 ntBASIC4.42□□□□□ -1.7
CDH12P55289 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDH12P55289 AL161909.1-201ENST00000397390 712 ntBASIC4.42□□□□□ -1.7
CDH12P55289 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 ARL4AP5-201ENST00000404372 599 ntBASIC4.42□□□□□ -1.7
CDH12P55289 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH12P55289 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 AC016907.1-201ENST00000419483 435 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AL355433.1-201ENST00000422804 300 ntBASIC4.42□□□□□ -1.7
CDH12P55289 BX119904.4-201ENST00000424402 301 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AC234781.2-201ENST00000426370 994 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH12P55289 RPS17P8-201ENST00000434525 335 ntBASIC4.42□□□□□ -1.7
CDH12P55289 PPIAP13-201ENST00000434706 478 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDH12P55289 GSTA7P-201ENST00000438425 448 ntBASIC4.42□□□□□ -1.7
CDH12P55289 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH12P55289 RPL23AP56-201ENST00000460778 453 ntBASIC4.42□□□□□ -1.7
CDH12P55289 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 GAPDHP36-201ENST00000480688 918 ntBASIC4.42□□□□□ -1.7
CDH12P55289 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 AC011352.3-201ENST00000505162 593 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 AC048346.1-201ENST00000510247 144 ntBASIC4.42□□□□□ -1.7
CDH12P55289 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 TCP11X3P-202ENST00000514289 1254 ntBASIC4.42□□□□□ -1.7
CDH12P55289 RN7SKP66-201ENST00000516681 231 ntBASIC4.42□□□□□ -1.7
CDH12P55289 RNU6-759P-201ENST00000516740 103 ntBASIC4.42□□□□□ -1.7
CDH12P55289 snoU109.6-201ENST00000516831 118 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.42□□□□□ -1.7
CDH12P55289 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH12P55289 AC093249.4-201ENST00000564755 259 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AC079171.1-201ENST00000568788 914 ntBASIC4.42□□□□□ -1.7
CDH12P55289 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 AC022069.1-201ENST00000582910 658 ntBASIC4.42□□□□□ -1.7
CDH12P55289 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 AC115085.1-201ENST00000588924 229 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AL390816.3-201ENST00000604527 1066 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AC072039.2-201ENST00000608883 439 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AC243654.2-201ENST00000612843 443 ntBASIC4.42□□□□□ -1.7
CDH12P55289 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 uc_338.18-201ENST00000615451 175 ntBASIC4.42□□□□□ -1.7
CDH12P55289 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 AL359757.1-201ENST00000623176 255 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AC139792.2-201ENST00000624218 587 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH12P55289 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH12P55289 CDRT1-208ENST00000630868 794 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AC116618.1-201ENST00000634617 774 ntBASIC4.42□□□□□ -1.7
CDH12P55289 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.42□□□□□ -1.7
CDH12P55289 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDH12P55289 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH12P55289 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 Z99496.1-201ENST00000469424 1477 ntBASIC4.42□□□□□ -1.7
CDH12P55289 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH12P55289 MAPK10-349ENST00000641767 3661 ntBASIC4.42□□□□□ -1.7
CDH12P55289 MAPK10-286ENST00000641208 8747 ntBASIC4.42□□□□□ -1.7
CDH12P55289 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH12P55289 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH12P55289 MTCO1P11-201ENST00000429111 1528 ntBASIC4.41□□□□□ -1.7
CDH12P55289 AC083843.3-201ENST00000623679 2186 ntBASIC4.41□□□□□ -1.7
CDH12P55289 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH12P55289 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH12P55289 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH12P55289 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms