Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ARPC3P1-201ENST00000437218 533 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 KRT8P51-201ENST00000438938 274 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 OR7E125P-201ENST00000443450 846 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 AL161722.1-201ENST00000446972 1032 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.7□□□□□ -1.5
EPHB3P54753 AC239367.2-201ENST00000447309 705 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 RPL7P31-201ENST00000450192 724 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.7□□□□□ -1.5
EPHB3P54753 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.7□□□□□ -1.5
EPHB3P54753 SNRPCP2-201ENST00000504370 475 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 AC008802.1-201ENST00000519121 791 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.7□□□□□ -1.5
EPHB3P54753 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.7□□□□□ -1.5
EPHB3P54753 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.7□□□□□ -1.5
EPHB3P54753 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.7□□□□□ -1.5
EPHB3P54753 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.7□□□□□ -1.5
EPHB3P54753 AC125494.2-201ENST00000602431 657 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 AC233280.2-201ENST00000603917 1070 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 AL592295.2-201ENST00000612578 206 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 AL121890.2-201ENST00000617644 465 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 AL359880.1-201ENST00000621879 266 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.7□□□□□ -1.5
EPHB3P54753 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EPHB3P54753 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EPHB3P54753 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.7□□□□□ -1.5
EPHB3P54753 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.7□□□□□ -1.5
EPHB3P54753 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EPHB3P54753 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
EPHB3P54753 Z99496.1-201ENST00000469424 1477 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.7□□□□□ -1.5
EPHB3P54753 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
EPHB3P54753 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
EPHB3P54753 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
EPHB3P54753 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
EPHB3P54753 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EPHB3P54753 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
EPHB3P54753 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHB3P54753 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHB3P54753 OR55B1P-203ENST00000641518 2602 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
EPHB3P54753 U3.2-201ENST00000362981 210 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 Y_RNA.573-201ENST00000384763 105 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
EPHB3P54753 MIR937-201ENST00000401271 86 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 HSPA8P15-201ENST00000401676 786 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 HMGB3P23-201ENST00000414981 585 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHB3P54753 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.69□□□□□ -1.5
EPHB3P54753 AC008850.1-201ENST00000427546 362 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 TIMM9P3-201ENST00000428659 274 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AL512649.1-201ENST00000428997 581 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.69□□□□□ -1.5
EPHB3P54753 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EPHB3P54753 AC104850.1-201ENST00000435940 476 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 UBE2FP3-201ENST00000436366 524 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHB3P54753 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHB3P54753 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHB3P54753 AL022238.1-201ENST00000442557 355 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHB3P54753 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHB3P54753 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHB3P54753 AL389915.2-201ENST00000454576 441 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AL035090.1-201ENST00000454835 332 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 RN7SL188P-201ENST00000469842 285 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 RPL7AP6-201ENST00000477943 801 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AC090013.1-201ENST00000485147 480 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EPHB3P54753 AC019235.1-201ENST00000503847 207 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHB3P54753 AC093815.1-201ENST00000508637 280 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 GAPDHP62-201ENST00000515313 990 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.69□□□□□ -1.5
EPHB3P54753 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHB3P54753 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHB3P54753 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.69□□□□□ -1.5
EPHB3P54753 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.69□□□□□ -1.5
EPHB3P54753 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.69□□□□□ -1.5
EPHB3P54753 DUX4L52-201ENST00000549363 777 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.69□□□□□ -1.5
EPHB3P54753 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.69□□□□□ -1.5
EPHB3P54753 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.69□□□□□ -1.5
EPHB3P54753 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHB3P54753 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.69□□□□□ -1.5
EPHB3P54753 MIR3691-201ENST00000578066 90 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AC020914.6-201ENST00000594327 272 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.69□□□□□ -1.5
EPHB3P54753 AC008277.2-201ENST00000605196 797 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.69□□□□□ -1.5
EPHB3P54753 AL020991.1-201ENST00000612314 373 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AC093838.1-201ENST00000613014 469 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AC009233.1-201ENST00000616477 371 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 AC068870.2-201ENST00000620635 389 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.69□□□□□ -1.5
EPHB3P54753 CYP4F35P-202ENST00000636121 390 ntBASIC5.69□□□□□ -1.5
EPHB3P54753 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
EPHB3P54753 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
EPHB3P54753 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.69□□□□□ -1.5
EPHB3P54753 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
EPHB3P54753 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms