Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.48□□□□□ -1.69
LHX1P48742 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.48□□□□□ -1.69
LHX1P48742 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.48□□□□□ -1.69
LHX1P48742 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.48□□□□□ -1.69
LHX1P48742 RPL21P133-201ENST00000443666 476 ntBASIC4.48□□□□□ -1.69
LHX1P48742 AC044797.1-201ENST00000445744 679 ntBASIC4.48□□□□□ -1.69
LHX1P48742 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LHX1P48742 MTND2P8-201ENST00000450555 1025 ntBASIC4.48□□□□□ -1.69
LHX1P48742 NUTF2P7-201ENST00000453086 375 ntBASIC4.48□□□□□ -1.69
LHX1P48742 RPL21P18-201ENST00000469899 480 ntBASIC4.48□□□□□ -1.69
LHX1P48742 TRBV8-2-201ENST00000475637 270 ntBASIC4.48□□□□□ -1.69
LHX1P48742 DEFB109F-201ENST00000491870 277 ntBASIC4.48□□□□□ -1.69
LHX1P48742 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.48□□□□□ -1.69
LHX1P48742 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.48□□□□□ -1.69
LHX1P48742 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.48□□□□□ -1.69
LHX1P48742 AC010285.3-201ENST00000511668 676 ntBASIC4.48□□□□□ -1.69
LHX1P48742 MTCO1P35-201ENST00000515270 228 ntBASIC4.48□□□□□ -1.69
LHX1P48742 MIR2116-201ENST00000517221 80 ntBASIC4.48□□□□□ -1.69
LHX1P48742 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.48□□□□□ -1.69
LHX1P48742 AC008694.2-201ENST00000517591 306 ntBASIC4.48□□□□□ -1.69
LHX1P48742 AC100770.1-201ENST00000532310 322 ntBASIC4.48□□□□□ -1.69
LHX1P48742 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.48□□□□□ -1.69
LHX1P48742 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.48□□□□□ -1.69
LHX1P48742 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.48□□□□□ -1.69
LHX1P48742 AC007224.1-201ENST00000564410 144 ntBASIC4.48□□□□□ -1.69
LHX1P48742 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.48□□□□□ -1.69
LHX1P48742 RN7SL622P-201ENST00000585292 275 ntBASIC4.48□□□□□ -1.69
LHX1P48742 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.48□□□□□ -1.69
LHX1P48742 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.48□□□□□ -1.69
LHX1P48742 AC144521.1-201ENST00000607148 956 ntBASIC4.48□□□□□ -1.69
LHX1P48742 AC243654.2-201ENST00000612843 443 ntBASIC4.48□□□□□ -1.69
LHX1P48742 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.48□□□□□ -1.69
LHX1P48742 AC010608.2-201ENST00000624830 470 ntBASIC4.48□□□□□ -1.69
LHX1P48742 AC083899.2-201ENST00000423285 1376 ntBASIC4.48□□□□□ -1.69
LHX1P48742 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LHX1P48742 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LHX1P48742 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LHX1P48742 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LHX1P48742 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LHX1P48742 HSPA8P19-201ENST00000505359 1517 ntBASIC4.47□□□□□ -1.69
LHX1P48742 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LHX1P48742 AC067945.1-201ENST00000342609 618 ntBASIC4.47□□□□□ -1.69
LHX1P48742 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.47□□□□□ -1.69
LHX1P48742 RNU1-94P-201ENST00000362627 173 ntBASIC4.47□□□□□ -1.69
LHX1P48742 RNU6-207P-201ENST00000384137 107 ntBASIC4.47□□□□□ -1.69
LHX1P48742 ATP5F1P2-201ENST00000398143 760 ntBASIC4.47□□□□□ -1.69
LHX1P48742 RN7SKP33-201ENST00000410942 340 ntBASIC4.47□□□□□ -1.69
LHX1P48742 GSTM3P2-201ENST00000412746 530 ntBASIC4.47□□□□□ -1.69
LHX1P48742 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LHX1P48742 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.47□□□□□ -1.69
LHX1P48742 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.47□□□□□ -1.69
LHX1P48742 RPS26P47-201ENST00000427219 348 ntBASIC4.47□□□□□ -1.69
LHX1P48742 SKP1P3-201ENST00000429280 487 ntBASIC4.47□□□□□ -1.69
LHX1P48742 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.47□□□□□ -1.69
LHX1P48742 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.47□□□□□ -1.69
LHX1P48742 GXYLT1P1-201ENST00000446657 490 ntBASIC4.47□□□□□ -1.69
LHX1P48742 TPMTP4-201ENST00000450749 678 ntBASIC4.47□□□□□ -1.69
LHX1P48742 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.47□□□□□ -1.69
LHX1P48742 GTF2IP12-201ENST00000456547 356 ntBASIC4.47□□□□□ -1.69
LHX1P48742 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.47□□□□□ -1.69
LHX1P48742 AC108145.1-201ENST00000503770 153 ntBASIC4.47□□□□□ -1.69
LHX1P48742 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
LHX1P48742 PGBD4P4-201ENST00000509673 613 ntBASIC4.47□□□□□ -1.69
LHX1P48742 IGKV2-36-201ENST00000519999 223 ntBASIC4.47□□□□□ -1.69
LHX1P48742 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.47□□□□□ -1.69
LHX1P48742 AC083923.1-201ENST00000523708 376 ntBASIC4.47□□□□□ -1.69
LHX1P48742 AP003066.2-201ENST00000529375 555 ntBASIC4.47□□□□□ -1.69
LHX1P48742 AC006518.1-201ENST00000541449 943 ntBASIC4.47□□□□□ -1.69
LHX1P48742 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.47□□□□□ -1.69
LHX1P48742 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LHX1P48742 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LHX1P48742 RN7SL600P-201ENST00000581811 299 ntBASIC4.47□□□□□ -1.69
LHX1P48742 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.47□□□□□ -1.69
LHX1P48742 AL591034.3-201ENST00000605511 685 ntBASIC4.47□□□□□ -1.69
LHX1P48742 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.47□□□□□ -1.69
LHX1P48742 AC116447.1-201ENST00000613153 453 ntBASIC4.47□□□□□ -1.69
LHX1P48742 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LHX1P48742 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.47□□□□□ -1.69
LHX1P48742 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.47□□□□□ -1.69
LHX1P48742 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.47□□□□□ -1.69
LHX1P48742 AL590396.2-201ENST00000636511 1041 ntBASIC4.47□□□□□ -1.69
LHX1P48742 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LHX1P48742 AC100871.1-201ENST00000507871 1456 ntBASIC4.47□□□□□ -1.69
LHX1P48742 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LHX1P48742 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LHX1P48742 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LHX1P48742 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
LHX1P48742 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LHX1P48742 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LHX1P48742 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
LHX1P48742 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
LHX1P48742 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.46□□□□□ -1.7
LHX1P48742 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
LHX1P48742 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LHX1P48742 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LHX1P48742 RNU6-603P-201ENST00000411403 107 ntBASIC4.46□□□□□ -1.7
LHX1P48742 RPS23P10-201ENST00000416185 486 ntBASIC4.46□□□□□ -1.7
LHX1P48742 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.46□□□□□ -1.7
LHX1P48742 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.46□□□□□ -1.7
LHX1P48742 AL354692.1-201ENST00000423044 315 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms