Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.93□□□□□ -1.78
CDX1P47902 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CDX1P47902 RNU6-582P-201ENST00000362989 107 ntBASIC3.93□□□□□ -1.78
CDX1P47902 RNA5SP123-201ENST00000363244 119 ntBASIC3.93□□□□□ -1.78
CDX1P47902 RNU6-839P-201ENST00000363347 108 ntBASIC3.93□□□□□ -1.78
CDX1P47902 RNU1-83P-201ENST00000363426 164 ntBASIC3.93□□□□□ -1.78
CDX1P47902 RNU6-115P-201ENST00000364310 107 ntBASIC3.93□□□□□ -1.78
CDX1P47902 RHOT1P2-201ENST00000366423 333 ntBASIC3.93□□□□□ -1.78
CDX1P47902 SNORA2.3-201ENST00000383920 135 ntBASIC3.93□□□□□ -1.78
CDX1P47902 RNU6-441P-201ENST00000384545 106 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AL133264.1-201ENST00000407157 562 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AL139098.1-201ENST00000407291 389 ntBASIC3.93□□□□□ -1.78
CDX1P47902 U3.32-201ENST00000408116 212 ntBASIC3.93□□□□□ -1.78
CDX1P47902 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.93□□□□□ -1.78
CDX1P47902 PSMA2P3-201ENST00000429685 675 ntBASIC3.93□□□□□ -1.78
CDX1P47902 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.93□□□□□ -1.78
CDX1P47902 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.93□□□□□ -1.78
CDX1P47902 RPL7AP61-201ENST00000443410 636 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AL162388.1-201ENST00000450912 352 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AC091180.1-201ENST00000462104 372 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.93□□□□□ -1.78
CDX1P47902 RPS23P1-201ENST00000491662 432 ntBASIC3.93□□□□□ -1.78
CDX1P47902 RN7SL441P-201ENST00000492388 296 ntBASIC3.93□□□□□ -1.78
CDX1P47902 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CDX1P47902 AC018797.3-201ENST00000513388 1241 ntBASIC3.93□□□□□ -1.78
CDX1P47902 RNU6-885P-201ENST00000516607 104 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AP001207.2-201ENST00000519490 539 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.93□□□□□ -1.78
CDX1P47902 OR4C2P-201ENST00000530855 1064 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.93□□□□□ -1.78
CDX1P47902 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDX1P47902 AC005868.1-201ENST00000536421 331 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.93□□□□□ -1.78
CDX1P47902 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CDX1P47902 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC3.93□□□□□ -1.78
CDX1P47902 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.93□□□□□ -1.78
CDX1P47902 AL121834.1-201ENST00000572284 509 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.93□□□□□ -1.78
CDX1P47902 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.93□□□□□ -1.78
CDX1P47902 AP001180.3-201ENST00000582221 145 ntBASIC3.93□□□□□ -1.78
CDX1P47902 MIR4691-201ENST00000583764 85 ntBASIC3.93□□□□□ -1.78
CDX1P47902 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.93□□□□□ -1.78
CDX1P47902 BNIP3P40-201ENST00000596017 556 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AC105254.2-201ENST00000603636 436 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AC004948.1-201ENST00000609858 672 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.93□□□□□ -1.78
CDX1P47902 AP000255.1-201ENST00000610276 676 ntBASIC3.93□□□□□ -1.78
CDX1P47902 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.93□□□□□ -1.78
CDX1P47902 MFSD8-245ENST00000641743 948 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AC053481.2-202ENST00000582394 1500 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AC009951.1-201ENST00000623674 2614 ntBASIC3.93□□□□□ -1.78
CDX1P47902 AC073429.2-201ENST00000569694 1444 ntBASIC3.93□□□□□ -1.78
CDX1P47902 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDX1P47902 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CDX1P47902 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.93□□□□□ -1.78
CDX1P47902 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.93□□□□□ -1.78
CDX1P47902 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDX1P47902 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDX1P47902 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDX1P47902 ELL2P4-201ENST00000446870 1376 ntBASIC3.92□□□□□ -1.78
CDX1P47902 EIF2AP4-201ENST00000424793 1781 ntBASIC3.92□□□□□ -1.78
CDX1P47902 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDX1P47902 AC106754.1-201ENST00000562632 1513 ntBASIC3.92□□□□□ -1.78
CDX1P47902 AC025125.1-201ENST00000624743 1922 ntBASIC3.92□□□□□ -1.78
CDX1P47902 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CDX1P47902 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDX1P47902 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDX1P47902 SNORD116-12-201ENST00000384468 92 ntBASIC3.92□□□□□ -1.78
CDX1P47902 SNORA70E-201ENST00000384492 135 ntBASIC3.92□□□□□ -1.78
CDX1P47902 MIR124-3-201ENST00000384866 87 ntBASIC3.92□□□□□ -1.78
CDX1P47902 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CDX1P47902 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDX1P47902 MIR937-201ENST00000401271 86 ntBASIC3.92□□□□□ -1.78
CDX1P47902 AL121978.1-201ENST00000402778 359 ntBASIC3.92□□□□□ -1.78
CDX1P47902 AL021331.1-201ENST00000402817 582 ntBASIC3.92□□□□□ -1.78
CDX1P47902 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CDX1P47902 VDAC1P9-201ENST00000412766 841 ntBASIC3.92□□□□□ -1.78
CDX1P47902 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.92□□□□□ -1.78
CDX1P47902 AL139128.1-201ENST00000413921 941 ntBASIC3.92□□□□□ -1.78
CDX1P47902 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDX1P47902 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.92□□□□□ -1.78
CDX1P47902 AC009237.2-201ENST00000421358 284 ntBASIC3.92□□□□□ -1.78
CDX1P47902 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.92□□□□□ -1.78
CDX1P47902 AL590762.4-201ENST00000425885 253 ntBASIC3.92□□□□□ -1.78
CDX1P47902 HIGD1AP12-201ENST00000427832 281 ntBASIC3.92□□□□□ -1.78
CDX1P47902 OR51AB1P-201ENST00000429046 620 ntBASIC3.92□□□□□ -1.78
CDX1P47902 MTCO1P3-201ENST00000429327 192 ntBASIC3.92□□□□□ -1.78
CDX1P47902 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.92□□□□□ -1.78
CDX1P47902 B3GNT2P1-201ENST00000434960 952 ntBASIC3.92□□□□□ -1.78
CDX1P47902 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.92□□□□□ -1.78
CDX1P47902 AC092393.1-201ENST00000439625 742 ntBASIC3.92□□□□□ -1.78
CDX1P47902 CEACAMP9-201ENST00000442990 513 ntBASIC3.92□□□□□ -1.78
CDX1P47902 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.92□□□□□ -1.78
CDX1P47902 AC108161.1-201ENST00000461060 402 ntBASIC3.92□□□□□ -1.78
CDX1P47902 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.92□□□□□ -1.78
CDX1P47902 RN7SL319P-201ENST00000480656 221 ntBASIC3.92□□□□□ -1.78
CDX1P47902 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CDX1P47902 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.92□□□□□ -1.78
CDX1P47902 UBE2V1P12-201ENST00000503954 474 ntBASIC3.92□□□□□ -1.78
CDX1P47902 AC025674.1-201ENST00000507074 324 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms