Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC073587.1-201ENST00000447093 876 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 AL358232.1-201ENST00000448030 501 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 AL133162.1-201ENST00000463228 453 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 ACTR3P3-201ENST00000480448 893 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 METTL15P1-201ENST00000481421 1045 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.11□□□□□ -1.75
TNFSF9P41273 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFSF9P41273 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
TNFSF9P41273 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.11□□□□□ -1.75
TNFSF9P41273 AC018552.3-201ENST00000567416 561 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFSF9P41273 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TNFSF9P41273 LINC01109-201ENST00000603837 3081 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 MFSD8-236ENST00000641509 4050 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 SYT14P1-202ENST00000600441 1448 ntBASIC4.11□□□□□ -1.75
TNFSF9P41273 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
TNFSF9P41273 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
TNFSF9P41273 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF9P41273 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFSF9P41273 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF9P41273 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF9P41273 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF9P41273 AC019155.1-201ENST00000382242 574 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 RNU6-891P-201ENST00000384280 111 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 MIR200C-201ENST00000384980 68 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF9P41273 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF9P41273 AL160275.2-201ENST00000412010 394 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 RAB9AP3-201ENST00000412737 573 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF9P41273 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.1□□□□□ -1.75
TNFSF9P41273 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF9P41273 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFSF9P41273 AL035246.1-201ENST00000433554 1255 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 AL353748.1-201ENST00000440753 474 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TNFSF9P41273 RAB9AP1-201ENST00000449393 573 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.1□□□□□ -1.75
TNFSF9P41273 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.1□□□□□ -1.75
TNFSF9P41273 AC108941.1-201ENST00000502853 530 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 AC139783.2-201ENST00000504847 1145 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 HNRNPKP5-201ENST00000515300 253 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.1□□□□□ -1.75
TNFSF9P41273 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.1□□□□□ -1.75
TNFSF9P41273 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFSF9P41273 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.1□□□□□ -1.75
TNFSF9P41273 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF9P41273 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF9P41273 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.1□□□□□ -1.75
TNFSF9P41273 AL139395.1-201ENST00000603662 160 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 AL390816.3-201ENST00000604527 1066 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 AL354760.1-201ENST00000608357 643 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.1□□□□□ -1.75
TNFSF9P41273 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF9P41273 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF9P41273 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF9P41273 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TNFSF9P41273 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TNFSF9P41273 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TNFSF9P41273 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TNFSF9P41273 AC093535.2-201ENST00000624769 2326 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 AC022893.2-201ENST00000564832 3296 ntBASIC4.1□□□□□ -1.75
TNFSF9P41273 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF9P41273 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF9P41273 ASNSP1-201ENST00000518311 1939 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF9P41273 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.09□□□□□ -1.75
TNFSF9P41273 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF9P41273 AC007066.1-201ENST00000392902 381 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.09□□□□□ -1.75
TNFSF9P41273 RN7SKP222-201ENST00000410651 315 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 RNU6-603P-201ENST00000411403 107 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF9P41273 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.09□□□□□ -1.75
TNFSF9P41273 AJ239321.1-201ENST00000424255 564 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 MTCO1P45-201ENST00000431457 267 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF9P41273 RPL12P46-201ENST00000436610 195 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF9P41273 HMGB3P22-202ENST00000451823 572 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 TRBV12-2-201ENST00000489763 344 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 UBA52P3-201ENST00000491303 382 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF9P41273 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.09□□□□□ -1.75
TNFSF9P41273 RNU6-347P-201ENST00000516658 105 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.09□□□□□ -1.75
TNFSF9P41273 GTF2IP22-201ENST00000554443 182 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 AC024220.1-201ENST00000603675 484 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 AC112230.1-201ENST00000604342 547 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 AL137849.1-201ENST00000604767 169 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 RNU1-30P-201ENST00000606575 163 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 AC116447.1-201ENST00000613153 453 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.09□□□□□ -1.75
TNFSF9P41273 AC012442.3-202ENST00000636742 206 ntBASIC4.09□□□□□ -1.75
TNFSF9P41273 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF9P41273 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TNFSF9P41273 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.09□□□□□ -1.75
TNFSF9P41273 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TNFSF9P41273 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms